Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90817g00014 ATGGATCCTGATATCTTCTTGGACTTCTCATTCAGTGGGGGTGACAATTCATCTATAGTCTTAAATGGCAATAATAAACTCCAAGATAATGATCATGATAGTGGTAGTGGTGATTGTGATAAATCGGCTTCTTCAGATTCTGGGTGGAGTAGAGGGGAGGAGATAGTGAACAAAAGAGATGGATCTGTGGTAGTGAATCCATCCCCAAATAATAATAATAATAAAGAAAGTCTTCACAAAGGAAGAAACAGATCATCTTCATCATCATACCAATCAAAGAATCCTCATCAACAAACCAAGAAAATGGTTAAGAAGGTGGATTGGAATCCAGAATTGCACAGGCGATTTGTTGAGGCAGTGGAGCAGCTTGGAGTTGATAAAGCAGTCCCTTCAAAGATTCTAGAAATTATGGCAATTGACTCCCTAACTCGCCATAACATCGCTAGCCACCTTCAGGTTCAGCAAAAGGCAGTACCACCAAGAACACCATGTTTTCCACAACCTCTGACAACATGGAGATTTGGATCTCCACCAACTACCACCGTGGCGGGTATCCCACGGCAGGGCATGCCCAAGCCCCTAGTTGATTTAAATCCGTTAAAGGAAAGCGTAGATGCTGCTATTGGTGATGTATTATCAAAACCATGGCTGCCACTGCCACTTGGTCTTAAAGCTCCAGCGATAGAGTGTGTGATGGGTGGGTTACAGAGACAAGGAATTCCAAACATGCCAACCTAA 738 0.4295 MDPDIFLDFSFSGGDNSSIVLNGNNKLQDNDHDSGSGDCDKSASSDSGWSRGEEIVNKRDGSVVVNPSPNNNNNKESLHKGRNRSSSSSYQSKNPHQQTKKMVKKVDWNPELHRRFVEAVEQLGVDKAVPSKILEIMAIDSLTRHNIASHLQVQQKAVPPRTPCFPQPLTTWRFGSPPTTTVAGIPRQGMPKPLVDLNPLKESVDAAIGDVLSKPWLPLPLGLKAPAIECVMGGLQRQGIPNMPT 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90817g00014 245 SUPERFAMILY Homeodomain-like 105 153 IPR009057 -
Stsc90817g00014 245 Gene3D - 99 158 - -
Stsc90817g00014 245 MobiDBLite consensus disorder prediction 11 30 - -
Stsc90817g00014 245 FunFam Two-component response regulator 97 158 - -
Stsc90817g00014 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 159 IPR017930 -
Stsc90817g00014 245 MobiDBLite consensus disorder prediction 83 97 - -
Stsc90817g00014 245 NCBIfam myb-like DNA-binding domain, SHAQKYF class 104 153 IPR006447 GO:0003677
Stsc90817g00014 245 PANTHER TRANSCRIPTION ACTIVATOR GLK1 157 244 IPR044825 GO:0003700|GO:0045893
Stsc90817g00014 245 MobiDBLite consensus disorder prediction 11 104 - -
Stsc90817g00014 245 Pfam Myb-like DNA-binding domain 106 152 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90817g00014 Stsc-Chr90817 60625 62714 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90817g00014 105 152 G2-like Transcription Factor Family AT5G44190 83.333 3.38e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc90817g00014 Myb_DNA-binding 4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90817g00014 - - qlo:115957300 132.88