Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90816g00007 ATGGTGTACAGAAGGCCATTGAAATTGAAGTGTTTGAAGATAGTGATGGCTAATTTGTTGACAGTTTTTGTTGTGATGGGAGTTATAGTGAGTGGTTTCAGAATGGGAAGAGCAGATGGTTTGGACATGAATTACTATCTGTTTAGCTGCCCTTTTGTTGAATCTGTTGTTAAGGACATTGTCAATAGGGCATTGGAGGATGATCCTACACTTGCTGCTGCTCTTCTTAGAATGCACTTCCATGATTGTTTCATTCAGGGATGTGATGGATCAATTTTGATTGATTCTACAAGGGGTAACACAGCAGAAAAGGATTCACCAGCAAATTTGAGCTTGAGAGGCTATGAAATCATAGATGACATCAAAGAAGAGCTTGAAAGACAATGTCCTGGAGTGGTTTCATGTGCTGATATTCTTGCTTTGGCTGCTAGAGATGCAGTTTTCTTTGCAGGGGGACCAGTTTATGACATACCAAAGGGTAGAAAAGATGGAACAAGGTCCAAAATTGAGGATACCATTAATCTTCCATCTCCAAACTTCAATGCTTCTGATCTCATCAAGATGTTTGGCCAACATGGCTTTTCAGCACAAGAGATGGTGGCTCTCTCAGGGGCTCACACATTAGGAGTGGCTAGGTGTTCTTCTTTCAAGAACAGGCTACCAAAAAAGGATCCAACTTTGAACTCAGTATTTGCAAAGACACTCTCCCAAACATGCAGTGCTGGTGACAATGCTGAGCAGCCCTTTGACGAAACGAGGAACGATTTCGACAACTTGTATTTCGACGCATTGGTCTCCGGCAACGGCGTTCTCACATCGGATCAAACACTATTTGTTAGCCCAAAAACTAGGAACTCTGTCAACTCTTATGCACAGAACCAAGCCTTGTTCTTCTTGGATTTCCAAGAAGCTATGGTCAAAATGAGCTTGCTTGACGTCAAAGAAGGTTCCAAGGGCCAAGTTAGAGATAACTGCCGCAAAATAAACTGA 990 0.4222 MVYRRPLKLKCLKIVMANLLTVFVVMGVIVSGFRMGRADGLDMNYYLFSCPFVESVVKDIVNRALEDDPTLAAALLRMHFHDCFIQGCDGSILIDSTRGNTAEKDSPANLSLRGYEIIDDIKEELERQCPGVVSCADILALAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTINLPSPNFNASDLIKMFGQHGFSAQEMVALSGAHTLGVARCSSFKNRLPKKDPTLNSVFAKTLSQTCSAGDNAEQPFDETRNDFDNLYFDALVSGNGVLTSDQTLFVSPKTRNSVNSYAQNQALFFLDFQEAMVKMSLLDVKEGSKGQVRDNCRKIN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90816g00007 329 Pfam Peroxidase 58 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 SUPERFAMILY Heme-dependent peroxidases 40 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 CDD secretory_peroxidase 40 328 IPR033905 GO:0004601|GO:0042744
Stsc90816g00007 329 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Stsc90816g00007 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Stsc90816g00007 329 FunFam Peroxidase 44 183 - -
Stsc90816g00007 329 Gene3D - 44 329 - -
Stsc90816g00007 329 ProSiteProfiles Plant heme peroxidase family profile. 40 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90816g00007 329 Gene3D Peroxidase, domain 2 176 308 - -
Stsc90816g00007 329 FunFam Peroxidase 176 308 - -
Stsc90816g00007 329 PANTHER - 23 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90816g00007 Stsc-Chr90816 53307 54945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90816g00007 13 329 Peroxidase AT4G33420 70.662 5.27e-162 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90816g00007 K00430 - gmx:100809245 526.554