Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90810g00002 ATGGTGGTAGAGGCTCCGAAATTTTTTCTGTCGAGCAAAGAGATGAAGAACACTAAGTCAAAGTTGCCGGTGGTTGTTGATGCAATGGTAAGGAGAAAGAACAACTGCAACGACAAAGATTGTGGCGCAGATCTTGGAAGAAGGCGAAGATGGAGGCTGAAGCCACCACACCTTCCCCCTGACTTCAAGCTCTTCATTGGAAGCCTTCCTTTCTCCGTTGACAGCCCCCAACTCGCCGAGATTTTTGAAAATGTTGATACCTTCTTGGTGAAAGGTTGGTTTTCAGATTTCCATGGGAGGGATTACAATTGTGAAGTTGCGGAAAGGTCAATAGGTGAAGCTTTGGGTAATTGCTTGGAAGGGGATTGGCAAAGAAGGGAAAAAAAGCTTTCTATTGAGATTGCACGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGATAAAGCCAGCAACACTCTTAAGTGGCTCTTAACAAAGTCAAAGAGAGCAATTAAGGAGTTAGATAGAAGCAAGCAACAAAGTAGCAGTGGTAATAACAATGGTGGTGGTGTTACCAATTACATTAAGAACTTCTCTTCTTCCTCTTTTCATGAAGGCAAATATGAGTTTAAACAAACTTCAAGTCAG 630 0.4222 MVVEAPKFFLSSKEMKNTKSKLPVVVDAMVRRKNNCNDKDCGADLGRRRRWRLKPPHLPPDFKLFIGSLPFSVDSPQLAEIFENVDTFLVKGWFSDFHGRDYNCEVAERSIGEALGNCLEGDWQRREKKLSIEIARKFFDLQDMLGFDKASNTLKWLLTKSKRAIKELDRSKQQSSSGNNNGGGVTNYIKNFSSSSFHEGKYEFKQTSSQ 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90810g00002 210 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 42 177 IPR005333 GO:0003700
Stsc90810g00002 210 MobiDBLite consensus disorder prediction 168 187 - -
Stsc90810g00002 210 ProSiteProfiles TCP domain profile. 99 168 IPR017887 -
Stsc90810g00002 210 SUPERFAMILY RNA-binding domain, RBD 46 86 IPR035979 GO:0003676
Stsc90810g00002 210 MobiDBLite consensus disorder prediction 171 187 - -
Stsc90810g00002 210 Pfam TCP family transcription factor 129 184 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90810g00002 Stsc-Chr90810 21650 22968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90810g00002 126 172 TCP Transcription Factor Family AT1G67260 70.213 1.43e-14 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc90810g00002 TCP 8.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90810g00002 - - aip:107637396 93.9745