Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90804g00005 ATGGCTGTTGAGGAATCTGAGCCTGTGATTCCTGAACTAGAAAGAGAAGAGAATTTGATTGCTGCAGCAAAGCATATTGTGAAGGCATTAGGATCAAACAAGAACCTTACCAATGATGCCAAGAAGGTTCTGGCTGATCTTGGCACCAAGTTGTCATCCATGAGCATTCCTAGTGAGATGGAGGAGGGGAAGGAAGGGGAAGAGGATGAGGAGGAAGAGGAAGAGGAGGAAGAAGGTGCTATGAATGCTACTGAAGACCGGATTAATGTGATTCAGGAGAAAATCATGAGATGGGAGGAAGATCAGTCTATGATTTGGGATTTGGGGCCCGAAGAAGCATCCGAGTATCTGAATGCAGCTAATGAAGCTCGCCGTTTGATTGAGAAGTTGGAGAGTTTCAATTTGAGTAAAGATGATCAAGAGTATAAGCTTTTGCAGAGGGCTTATAGTGTTCTTCAAACAGCTATGGCTCGGCTCGAGGAAGAGTTCAGGAACTTGCTTATCCAGAACAGGCAACCTTTTGAACCTGAATATGTGTCTTTTCGATCAAGCGAAGAAGATCCTGTTGATGAGAACTCTATTGTCTCTCTGGGTGATGAATCGGTTGACGAATCGCTTCAAAGAGATAGTGTTAGCAGAGCTGCAGAGGAGCATATAATTGATTTAGTCCATCCAGGTGTGATCCCGGATCTCAGGTGCATTGCAAATCTATTGTTTGCTTCTAATTATGTCCAAGAATGTTCTCATGCTTATACCATTGTCAGAAGGGATGCTTTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTGAGCATTGAAGATGTCTTGAAGATGGAGTGGGGTACGTTGAATTCGAAAATCAAGAGATGGATTTGGGCTTTGAAAATCTTTGTTAGGGTGTATCTTGCAAGTGAGAGGTGGCTAAGCGACCAGATTTTCGGGGAGGGTGAACCTGTTAGCATTGCTTGTTTCGTTGATGCATCCAAGGCTTCGATACTGCAGCTTCTGAATTTCGGTGAAGCCATGTCTATTGGTCCTCACAAACCTGAGAAGCTGTTTCGCATTCTCGACATGTATGAGGTTCTAGCAGACCTTATGCCAGACCTGGACTTTTTGTACTTAGATGATGTTGGTTCTTCTGTTAGAATTGAATGCCATGAGGTTTTAAAGAGGCTTGGTGATTGTGTGAGGGTGACATTTATCGAATTTGAGAATGCCATTGCAGCAAATGCATCTTCAACTCCTTTTATAGGTGGTGGAATACATCCTTTGACAAGATATGTCATGAATTATCTCAGGACTCTCACTGATTACAGCGAATCGCTTAATCTGCTTCTGAAGGACAGGGAAGAAGAGGATGCCATTTCCCTTTCACCTGATATGAGTCCAGGTACAGAAGAAGATAGCAAAAGCCCGGGATCTCCAAGTGGAGTCTCCTCAATGACCCTCCACTTCCGATCGGTTGCATCAGTCTTGGAACGTAACCTTGAAGAGAATTCCTTGTTATATAAAGAGGTTCCATTGCAGCATTTGTTCTTAATGAACAACCTACATTACATGGCAGAAAAAGTTAAGGGGTCTGAACTTCGGCTCATATATGGAGACGAATGGATTCGAAAGCGCAACTGGAAGTTTCAGCAGCATGCAATGAAATATGAGAGAGCTAGTTGGAGTTCCATTCTCAACTTGCTCAAGGATGAGGGAATTCATGTTCCTGGGACAACTTCCATCTCTAAAACTCTTCTTAGGGAGAGACTAAGGAGCTTCTACCTCGGCTTTGAGGATGTTTACCGTATCCAAACAGCTTGGCTTATCCCGGATGTGCAGCTTCGCGAGGATTTGCGGATTTCGATATCACTCAAGGTAATCCAAGCTTATAGGACATTTGTTGGAAGGCATAATAGTCACTTAAGTGACAAACACATCAAATACACTGCTGATGATTTAGAAAATTACCTACTTCATTTCTTTGAGGGATCACAAAAATATTTGCAAAACCCACATAGGAGGTGA 2016 0.4296 MAVEESEPVIPELEREENLIAAAKHIVKALGSNKNLTNDAKKVLADLGTKLSSMSIPSEMEEGKEGEEDEEEEEEEEEGAMNATEDRINVIQEKIMRWEEDQSMIWDLGPEEASEYLNAANEARRLIEKLESFNLSKDDQEYKLLQRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSFRSSEEDPVDENSIVSLGDESVDESLQRDSVSRAAEEHIIDLVHPGVIPDLRCIANLLFASNYVQECSHAYTIVRRDALDECLFILEMERLSIEDVLKMEWGTLNSKIKRWIWALKIFVRVYLASERWLSDQIFGEGEPVSIACFVDASKASILQLLNFGEAMSIGPHKPEKLFRILDMYEVLADLMPDLDFLYLDDVGSSVRIECHEVLKRLGDCVRVTFIEFENAIAANASSTPFIGGGIHPLTRYVMNYLRTLTDYSESLNLLLKDREEEDAISLSPDMSPGTEEDSKSPGSPSGVSSMTLHFRSVASVLERNLEENSLLYKEVPLQHLFLMNNLHYMAEKVKGSELRLIYGDEWIRKRNWKFQQHAMKYERASWSSILNLLKDEGIHVPGTTSISKTLLRERLRSFYLGFEDVYRIQTAWLIPDVQLREDLRISISLKVIQAYRTFVGRHNSHLSDKHIKYTADDLENYLLHFFEGSQKYLQNPHRR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90804g00005 671 MobiDBLite consensus disorder prediction 456 480 - -
Stsc90804g00005 671 SUPERFAMILY Cullin repeat-like 101 659 IPR016159 -
Stsc90804g00005 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 81 660 IPR004140 GO:0000145|GO:0006887
Stsc90804g00005 671 MobiDBLite consensus disorder prediction 47 82 - -
Stsc90804g00005 671 Pfam Exo70 exocyst complex subunit 289 655 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc90804g00005 671 Coils Coil 142 169 - -
Stsc90804g00005 671 Coils Coil 67 101 - -
Stsc90804g00005 671 Gene3D Exocyst complex component Exo70 94 667 - -
Stsc90804g00005 671 MobiDBLite consensus disorder prediction 62 81 - -
Stsc90804g00005 671 MobiDBLite consensus disorder prediction 463 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90804g00005 Stsc-Chr90804 23214 25229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90804g00005 12 671 EXO70 exocyst subunit family AT3G29400 49.629 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90804g00005 K07195 - gmx:100799102 1137.87