Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90801g00013 ATGAGGTTGGGGAATTTATACTGTGATCCACTCATGGCGGCGTGCTCCGGCGGCCACAAGATAACTGCGAGGCAGCGATGGACGCCGACGCCGATTCAGCTTCAGATTCTGGAGCGTATATTTGACGAAGGAAATGGCACTCCAAACAAACAGAAGATCAAGGAGATAACCGTTGAGCTCGGTCAACATGGCCAGATTTCAGAGACTAATGTCTATAATTGGTTCCAGAATAGAAGGGCTCGTTCCAAGCGCAAGCAACTCCTTCCTTCTCAGAATAATCTAGAAGCAGAAGCAGACGCAGAAGTCGAGTCTCCGAAAGAGAAAAAAATGCCAGAAATTCAAGAAACAATTCAACTTCATTCCTATGAGAACTTGTCCCACACTACTAGTCCTGACCTAGGATTTGAGCAACTCATGAGTAAAATAGAAGCTGCAAGCTGCTATGGTTCTTATTTTCTTTAG 462 0.4524 MRLGNLYCDPLMAACSGGHKITARQRWTPTPIQLQILERIFDEGNGTPNKQKIKEITVELGQHGQISETNVYNWFQNRRARSKRKQLLPSQNNLEAEADAEVESPKEKKMPEIQETIQLHSYENLSHTTSPDLGFEQLMSKIEAASCYGSYFL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90801g00013 153 CDD homeodomain 24 86 IPR001356 GO:0003677
Stsc90801g00013 153 SUPERFAMILY Homeodomain-like 23 86 IPR009057 -
Stsc90801g00013 153 ProSiteProfiles 'Homeobox' domain profile. 20 85 IPR001356 GO:0003677
Stsc90801g00013 153 MobiDBLite consensus disorder prediction 83 109 - -
Stsc90801g00013 153 SMART HOX_1 22 89 IPR001356 GO:0003677
Stsc90801g00013 153 Pfam Homeodomain 24 84 IPR001356 GO:0003677
Stsc90801g00013 153 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 135 IPR044559 GO:0003700
Stsc90801g00013 153 Gene3D - 25 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90801g00013 Stsc-Chr90801 71022 72003 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90801g00013 2 110 Wox Gene Family AT4G35550 66.964 5.00e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Stsc90801g00013 Homeodomain 2.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90801g00013 - - var:108342525 225.713