Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90799g00011 ATGGCTGCAAAACTTGAAGGAGGAGCATATCTCTCTTCTTTTGTTGATGCTATCTCAGAGAAGCTGTCTTCAATACTTGAAGATGACTTTGTCCTCGAAGTAGACGACTCTGCCCCGGAGTTGCTTCAAAGGTTGGATGATTGTCTGTGTGATGTTGGACCTGTGCTTGATGATGCTGAGATGAAGCAGTTCAATGACAAGAGAGTGAAGAAGTGGCTCGTTGACCTCCAAGATGCTCTCTACATGGCTGATGACTTGGTGGATGAACTCTCCACTAAAGCTGCCACTGCCACTTCAAGGGATCCAGGTAACTCTTATGACTGGTCCCGCCCTGTTGATTCAATTATTGATGATAGTGGTGTCAATGTCATCAAAAACATACTTGGCAAACTAGAGTTTGTCGTAGGAAGAAAAAGTAAACTCGGTTTGGAGAAGGGTGCCAAGGTGGACTTCTCGTCATGGAGAGTTCCATCCACATCTCTCGTCGTTAGTTCTGACATATTCGGTCGGGACGATGACAAGGAGAACATAATCAAATTGCTGTTAGATAATACCTGCGATGCTGAATCACCTGTGACTGTGGTTCCCATTGTGGGTATGGGTGGGATAGGAAAAACTACTTTGGCTCAACTTGTTTACAATGATGCTAAAGTCATAGAAAAATTTGACACTAGAGCATGGGTTTGTGTTGCTGAAAATCCTGACCCTATTAATGTTACAAGGACAATAATAGGGGCAGTAGATTCTTCTCCCTGTAACATGGATCATTTTGATTCACTACAGACTAATTTGAAGGAAAAGTTTTCTGGAAAGACATTTTTAGTTGTTTTAGACGATGTCTGGCATGACGAACAAGACACGTGGGAGGAATTTTTAAAACCATTTCGACATGGGAATAATGGGAGTAAGATTCTCCTAACAACTCGTAGCAAAAAGGTGGCTTCTGTGTTCGCAGCTAACAATCTACACTACCGGCTAAGTTTATTGTCGGAGGAAGATTGTTGGTCGGTGTTTTTGAAGCATTCATCTATTTCTACTAATTCCGAAGAATATGCAACTCTAGAATCAGTTGGTAGAAAAATTGTTGAGAAGTGTAAGGGGTTACCTTTGGCTGTGAAGACACTTGGTGGGTTACTACGCAATAATTATAATGAAGGAGATTGGGAGAATATACTTGAAAGTGGAATTTGGGAACTCTCGGAAGATAAAAGTAGGATTGTTCCTGCATTAAGAGTTAGTTATCATTACCTCCCTTCACATTTAAAGCGTTGTTTTGTTTATTGCTCATTATATCCAGAAGATTATCAATTTGACAAAAATGAATTGATTTTGTTATGGATGGCCGAAGATCTTTTACAACCAAAGAAAAATGACACATTAGAAAATATTGGTTGTGCTTATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAACCTTCCAGTAAAAATGGAAAGTTATTTGTAATGCATGATCTCATGCATGATCTAGCAACGTTTTTTGCTGGGAAATTCTGGTTCCAACTCAAAGAATTTGGCAATCGACACATGATAGACAACAAAACTCGTCATCTGTCATGTGCTGCAACTTATAAGGATGCCTTCAAATTATTACAAGAGCGCTATCATGGGGCAGTACACATGAGAACATTTTTAGATTTTACTGATTACACTTTCTATCAATACTCAATTGATATTGAAAGTGATTCCTGGTTCTTACAACAACAATTGGAATGTTTAAGAGTTTTTTCATTTGGTATCTTCGAAAGATTGCCTGATTCAATAGGTGAATTGAGTCATTTGCGTTATTTAAATCTCTCTAACTCACCTATCGTGACCTTGTCTGAGTCAGTGTGTAAATTATACAATCTCCAAACTTTGAAGCTGCGGGGTTGTCGAAAGCTAGAGATGCTTCCCAACCGTTTGCAAGATCTTGTGAGTCTGCGCCACCTTGATATTCGAGGTGCTTCTTGCCTTCTGATGGGGATGCCGAAGGGAATGAGCAAGTTAAAGCATCTAACCTTCTTAAGCGATTTTGTCGTTGGTGAGGAAGAAGACAACGGGATAAGGGAATTGGGAACGCTGGACAATCTTCATGGCTCATTTTGCATTTCCAAGTTGAAGAACATCAAGAATAGTGGTGAAGCTTTGGAGGCAAATATGGGCAACAAGAAGCACATCAGCACTTTAAATTTGGAATGGCTTCCGGATGGCAACGTTGATGATGTTCAAACCGTAAGAGATATACTAGACAAGTTACAACCTCATCAAAACTTGAAAGAATTATCAATTTGCGGTTATTGGGGTGAAACATTCCCAGATTGGTTAGGCCTTTCTGGTTACTCCAAAATGACCAAATTGAGTCTGGATGGTTGTATGAATTGTCGTGAGCTTCCTTCATTGGGACAGTTACCCTCTTTACAGCATCTGAAGATTTCTAATCTTGATAGGTTGGAGAAAATTGATTTAGAGTTTTTCAACAAAAACAGTGGATCATTTCTGCAGGAGACACCCTTCAAGTCTCTTGAAACTCTGATCATTGAGTGTATGTCTGATTGGAGGGAGTGGCATTTCCCTGATGAGTTTGATGGTTTTCCTCAGCTTAGAATCCTTACAATAAAAAGATGTCCGGTGTTAAGGGGAGATCTGCCTGCTCACCTTCCAGCACTGGAGGAACTTACCATTTATGCGTGTGAAGATCTTGCATGCTCTTTTCCGAGGGCTCCCAAGCTTCGCCAATTAATTGTACAGAGAGATGATGAGACTTTCACTGCAGAAAGCATTGTAGAAATTTCACAAACCCAGCTGGCAGTGTCCGCATTGGAGTGCTTGTCCTACATCCAATCTCCACGTGTCCAAGATATACATATCACGTTCTGTGAGTCAGCGATATCAATTTCCGCAGATTATTTGCCTCCTTCATTACAATGTCTGCAAATCTGTCATTGTCCGGAATTAACAATCTCAGAGCAACTGCAACACAAGTGGCTATCGGAGATAGTGGCAGTGGGGTGTAGGTCACTGACGACGTTTCCACTGGGGGACCTTCCAAATCTCAAGAAGCTCCGATTATATTATTGCAAAAACATGGAATATGTTGAGGTACCACATTCTCTTCCAAGTCTCCGTTATTTTCGCATCTCACATTGCCACAGTTTAGTATCCTTGCCGGCGCTAGGGAGGGCTGCTCCCGGTCTAGAGGTCCTACGTATATGCGATTGCCCAGAAATCGATTGTTTTGCTGAGGAGTGCCTCCCGCAGAGTTTGAAAACACTTCGCATCTATGGCTGCAACAAACTCGCAAGTTGGATAGTATCAAAGGGTTTACAGAGAGAAGGCCTTACCCATCTTGAGCTTAGCAAATGCAATGATGTGAAGTCGTTCCCAGGAGAGGGTTGCCTTCCACCTTCTCTTGAGTCTCTACAATTGAGGATGTTACCAAATCTGGAGACGCTCAACTGCAAGGGGCTTCACCATCTTACCTCTCTCAAAAAATTAACAATTGAAGACTGTGACAAGCTTGAGAATATCATACAAGAACATTTGCTTCCCTCCATACAAAATATCTACTTAGCGAATTGTGCTTTGACGGATAAGCTGGAAGAGCTGGAAAACGTACGGGTTGGTTTCTTTGACTACGACTGTATTGGGCCTCCTAGAGACACTGAAAGCAGTATTATTTCTTCTCTGAAAATTGTTGAATCTATGATGAGGACTGCTAGCTTGTGTGACACGAAAAGTGTCTTGGACTAG 3750 0.4123 MAAKLEGGAYLSSFVDAISEKLSSILEDDFVLEVDDSAPELLQRLDDCLCDVGPVLDDAEMKQFNDKRVKKWLVDLQDALYMADDLVDELSTKAATATSRDPGNSYDWSRPVDSIIDDSGVNVIKNILGKLEFVVGRKSKLGLEKGAKVDFSSWRVPSTSLVVSSDIFGRDDDKENIIKLLLDNTCDAESPVTVVPIVGMGGIGKTTLAQLVYNDAKVIEKFDTRAWVCVAENPDPINVTRTIIGAVDSSPCNMDHFDSLQTNLKEKFSGKTFLVVLDDVWHDEQDTWEEFLKPFRHGNNGSKILLTTRSKKVASVFAANNLHYRLSLLSEEDCWSVFLKHSSISTNSEEYATLESVGRKIVEKCKGLPLAVKTLGGLLRNNYNEGDWENILESGIWELSEDKSRIVPALRVSYHYLPSHLKRCFVYCSLYPEDYQFDKNELILLWMAEDLLQPKKNDTLENIGCAYFDELVARSFFQPSSKNGKLFVMHDLMHDLATFFAGKFWFQLKEFGNRHMIDNKTRHLSCAATYKDAFKLLQERYHGAVHMRTFLDFTDYTFYQYSIDIESDSWFLQQQLECLRVFSFGIFERLPDSIGELSHLRYLNLSNSPIVTLSESVCKLYNLQTLKLRGCRKLEMLPNRLQDLVSLRHLDIRGASCLLMGMPKGMSKLKHLTFLSDFVVGEEEDNGIRELGTLDNLHGSFCISKLKNIKNSGEALEANMGNKKHISTLNLEWLPDGNVDDVQTVRDILDKLQPHQNLKELSICGYWGETFPDWLGLSGYSKMTKLSLDGCMNCRELPSLGQLPSLQHLKISNLDRLEKIDLEFFNKNSGSFLQETPFKSLETLIIECMSDWREWHFPDEFDGFPQLRILTIKRCPVLRGDLPAHLPALEELTIYACEDLACSFPRAPKLRQLIVQRDDETFTAESIVEISQTQLAVSALECLSYIQSPRVQDIHITFCESAISISADYLPPSLQCLQICHCPELTISEQLQHKWLSEIVAVGCRSLTTFPLGDLPNLKKLRLYYCKNMEYVEVPHSLPSLRYFRISHCHSLVSLPALGRAAPGLEVLRICDCPEIDCFAEECLPQSLKTLRIYGCNKLASWIVSKGLQREGLTHLELSKCNDVKSFPGEGCLPPSLESLQLRMLPNLETLNCKGLHHLTSLKKLTIEDCDKLENIIQEHLLPSIQNIYLANCALTDKLEELENVRVGFFDYDCIGPPRDTESSIISSLKIVESMMRTASLCDTKSVLD 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90799g00011 1249 FunFam Probable disease resistance protein At1g61300 154 321 - -
Stsc90799g00011 1249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 428 IPR027417 -
Stsc90799g00011 1249 Gene3D - 413 498 IPR036388 -
Stsc90799g00011 1249 Gene3D - 328 412 IPR042197 -
Stsc90799g00011 1249 FunFam Probable disease resistance protein At1g63360 414 499 - -
Stsc90799g00011 1249 SUPERFAMILY L domain-like 488 905 - -
Stsc90799g00011 1249 Gene3D - 15 118 - -
Stsc90799g00011 1249 Gene3D - 151 321 IPR027417 -
Stsc90799g00011 1249 Gene3D Ribonuclease Inhibitor 545 944 IPR032675 -
Stsc90799g00011 1249 Gene3D Ribonuclease Inhibitor 1108 1206 IPR032675 -
Stsc90799g00011 1249 Gene3D Ribonuclease Inhibitor 945 1107 IPR032675 -
Stsc90799g00011 1249 Pfam Rx N-terminal domain 14 98 IPR041118 -
Stsc90799g00011 1249 PANTHER DISEASE RESISTANCE PROTEIN RP 73 898 IPR044974 GO:0006952
Stsc90799g00011 1249 Pfam NB-ARC domain 171 393 IPR002182 GO:0043531
Stsc90799g00011 1249 SUPERFAMILY L domain-like 952 1199 - -
Stsc90799g00011 1249 PRINTS Disease resistance protein signature 267 281 - -
Stsc90799g00011 1249 PRINTS Disease resistance protein signature 194 209 - -
Stsc90799g00011 1249 PRINTS Disease resistance protein signature 618 634 - -
Stsc90799g00011 1249 PRINTS Disease resistance protein signature 365 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90799g00011 Stsc-Chr90799 61316 67322 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90799g00011 192 497 WRKY Transcription Factor Family AT5G45050 25.000 8.44e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90799g00011 - - ahf:112708719 1659.81