Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90799g00008 ATGGCTGCAAAACTTGAAGGTGGAGCTTACCTCTCTTCATTAGTTGATGCTATCTCGAAGAAGCTGTCTTCATTACTTGAAGATGACACTGTTCTCGACTCTACCCTGGAGTTGCTTGAAAGGTTGGATGATTGTCTATGTGATGTTGGACCTGTGCTTGATGATGCTGAGCTGAAGCAGTTCCGTAACGAGAGAGTGAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATATGGCTGATGACTTGCTCGATGAACTCTCCACTAAGGCTGCCACTACCACTCCAAGGGATCCAGGTAACTCTTATGACTGGTCTCGCCATGTTGATTCAATTATTGATGATGGTGGTGTCAATGTCATCCAAAAAATAGTTGGCAAACTAGAGTCTGTTGTAGGACGAAAAGATAGATTCGGTTTGGAGAAGAGTGCTAAGGTGGACTTCTCGTCTTGGAGAATTCCATCCACATCTCTCGTTGTTAGTTCTGACATATTTGGCCGGGACAAAGACAAAGAGAACATAATCAAATTCCTGTTAGATGATACCTGTGATGCTGAATCACCTGAGAGTGTGACTGTGATCCCCATTGTGGGTATGGGTGGGATAGGAAAAACTACTTTGGCTCAACTAGTTTACAATGATGCCGAAGTCGTGGGAAAATTTGACACTAGAGCATGGGTGTGTGTTGCTGAAAGTCCTAACCCTATTAATGTCACAAAAACAATAATAGGGGCAATAGATTCTTCTCCCTGTAACATAGATCATTTTGATTCACTTCAGACAAATTTGAAGAAAAAGTTGTCTGAAAAGATATTTTTAGTTGTTTTAGATGATGTCTGGGATGATCGACGAGATGTGTGGGAGGAATTTTTGAAACCTTTTCAATATGGGAATAATGGGAGCAAGATTCTCCTAACAACCCGTAGTGAAAAGGTGGCTTCTGTATTCACAGCTAACAATCTACACTATCGACTAAGTTTACTGTCGAAGGAAGATTGTTGGTCATTGTTTTTGAAGCATTCATCTATTTCTACTAATTCTAAAGAATATGCAACTCTAGAACCAATTGGTAGAAAAATTGTTGAAAAGTGTAAGGGGTTACCTTTGGCTGTGAAGACACTTGGTGGGTTACTGCGCAATAACTCTAATGAAGGAGATTGGGAGAATATACTTAAAAGTGAAATTTGGGAACTCTCAGAAGATAAAAGTAAAATTGTTCCTGCATTAAGAGTTAGTTACCATTACCTCCCTTCACATTTAAAGCGTTGTTTTGTTTATTGCTCGTTATATCCCGAAGATTATCAATTTGACAAAAATGAATTGATTTTGTTATGGATGGCCGAAGATCTTTTACAACCAATGGAAAATAACACATTAGAAAATATTGGATGTGCTTATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAACCTTCCACTAATAATGGGAAGTTATTTATAATGCATGATCTCATGCATGATCTAGCAATGTCTTTTGCTGGAAAATTCTTTTTCAGACTCAAAAAATTTGGCAATCCACAAATAATAGACCACAAAACTCGTCATTTGTCATATGCTATAAATTATAAGTATAGCATTAAATTATTTCGGGGGGCCTATAATAATGGAGCAGTAGACATGAGAACATTTTTAGATCTTACCGACTCTCTCCATGGTCACTCAATTGATATTGAGAGTGATTCTTTGCTGTTACAACAACAATTAGGGTGTTTAAGAGTTTTTTCATCTAGCCTCTTCAAAAAGTTGCCTGATTCAATAGATAAATTGATTCATTTGCGTTATTTAAATCTTTCCAAATCACCTATTGTGACCTTGCCTGAGTCAATATGTAAACTATACAATCTTCAAACTTTGAAGTTGACGAATTGTCTTCGACTAAAGATGCTTCCCGACCACTTGCAAGATCTTGTGAATCTGCGCCACCTTGACATTCGAGGTGTTTATCGTCTGAGAGAGATGCCGAAGGGAATGAGCAACTTAAGCCATCTAAACTTCTTAAGCGATTATATAGTTGGCGAGCAAGAAGACAATGGGGTAAGAGAATTGGGAACACTGGACGATCTTCATGGCTCATTTTGCATTTCCAAGTTGGAGAACATCAAGAATAGTGGTGAAGCTTTGCAGGCAATTATGGGTAACAAGAAGCACATCAATGCTTTAAGATTGAAATGGCTTCGAGATGGAGATGGTGACGTTGTTGATGTTCAAACCGAAAGAGATATACTTGTGAAGTTACAACCTCATCAAAACTTGAAAAAGTTGTCAATTAAGGGTTATTGGGGTGAAACGTTCCCAGATTGGTTAGGCCTCTCTTACTACTCCAAAATAACCAAATTGAGTTTGAATGGTTGTATGAATTGTCGTGAGCTTCCTTCACTGGGACAGTTACCCTCTTTACAATATTTGGAGATTTCTAAACTTGATAATTTGGAAGAAATTGGTTTAGAGTTTTTCAACAAAAACAGTGGATCATTTCAGCAGGAGACACCCTTCAAGTCTCTTGAAACGTTGATCATTAAGGGTATGTCTGTTTGGAGGGAGTGGCATTTTCCTGATGAGTTTGCTGGTTTTCCTCAACTTAAAATCCTTTCAATAATAAGTTGTCCGGTGTTAAGGGGAGATCTGCCTGGTCATCTTCTAGCTCTAGAGGAACTTACCATTGATGGATGTGAACAGCTTGCATGTTCGCTGCCGAAGGCTCCCAAACTTCACCAGTTATATGTAAAGGGTAATATGTCTTCTGGTACAGAACCACACAGTGTAGTAATTTTGGGAACCCAGCTGGCAATGTCCGCATTGGAGTGCGTGTCCCACATCCGACTGCCACGTGTCCAATATGTGAATATCAGCGAGTGTAAGTCAGCGATATCAATTTCAGGAGATTATTTGCCAGCTTCATTACAATATCTGGAAATCTTTGGGTGTCCGGAATTAACAATCTCAGAGCAACTGCAACACAAGTGGCTAACAGAGATAAAGGTAGAGGGGTGTGGATCACTGACGTTTCCATTGGGGGACCTTCCAAATCTCAAGAAGCTCGAATTATCTTATTGCTACAGCATGGAATATGTTGAGGTGTCACATGCTCTTCCAAGACTCCGTTATTTAAACATCTCATGTTGCCACTGTTTAGTGTCTTTGCCGGCGCTAGGGAGGGCTGCACCCCGTCTAGAGGACCTACGTGTACACCTTTGCCCAAAAATTGATTGTTTTTCTGAGGAGTGGCTTCCGCCGAGTTTGAAAATACTTTACATCACTGAGTGTGACAAACTCGCAAGTTGGATGGCATCAAGAGGTTTGCAGAGTCAAGGCCTTACCGACCTTTTGCTTACTCGATGCAAAGATGTAAAGTCATTCCCAGGAGAGGGTTGCCTTCCAGCTTCTCTTGAATTTCTACAATTGTGGGAGTTACATAATCTGGAAACTCTTGACTGCAAGGGGCTTCACCATCTTACCTCTCTCAAAAATTTAAAAATTAACTACTGTGACAAGCTTGAGAATATCATACAAGAACATTTGCTTCCCTCAATTGAAAATATCTACATAGGGAAATGTCCTTTGACGACTAAGCTGGAAGAGATGGAACACCCACGGATTCAATTCGTCACAGGCTTACTTGTTCCTTGTCTCTATCTGATTATTGTTGACTCTGTTTTAAATGTAGGGTTTGAGATTGCTAGAAAATGCAAGCCGTTTCGCAGATATGATAAATGA 3735 0.3968 MAAKLEGGAYLSSLVDAISKKLSSLLEDDTVLDSTLELLERLDDCLCDVGPVLDDAELKQFRNERVKKWLVDLQDALYMADDLLDELSTKAATTTPRDPGNSYDWSRHVDSIIDDGGVNVIQKIVGKLESVVGRKDRFGLEKSAKVDFSSWRIPSTSLVVSSDIFGRDKDKENIIKFLLDDTCDAESPESVTVIPIVGMGGIGKTTLAQLVYNDAEVVGKFDTRAWVCVAESPNPINVTKTIIGAIDSSPCNIDHFDSLQTNLKKKLSEKIFLVVLDDVWDDRRDVWEEFLKPFQYGNNGSKILLTTRSEKVASVFTANNLHYRLSLLSKEDCWSLFLKHSSISTNSKEYATLEPIGRKIVEKCKGLPLAVKTLGGLLRNNSNEGDWENILKSEIWELSEDKSKIVPALRVSYHYLPSHLKRCFVYCSLYPEDYQFDKNELILLWMAEDLLQPMENNTLENIGCAYFDELVARSFFQPSTNNGKLFIMHDLMHDLAMSFAGKFFFRLKKFGNPQIIDHKTRHLSYAINYKYSIKLFRGAYNNGAVDMRTFLDLTDSLHGHSIDIESDSLLLQQQLGCLRVFSSSLFKKLPDSIDKLIHLRYLNLSKSPIVTLPESICKLYNLQTLKLTNCLRLKMLPDHLQDLVNLRHLDIRGVYRLREMPKGMSNLSHLNFLSDYIVGEQEDNGVRELGTLDDLHGSFCISKLENIKNSGEALQAIMGNKKHINALRLKWLRDGDGDVVDVQTERDILVKLQPHQNLKKLSIKGYWGETFPDWLGLSYYSKITKLSLNGCMNCRELPSLGQLPSLQYLEISKLDNLEEIGLEFFNKNSGSFQQETPFKSLETLIIKGMSVWREWHFPDEFAGFPQLKILSIISCPVLRGDLPGHLLALEELTIDGCEQLACSLPKAPKLHQLYVKGNMSSGTEPHSVVILGTQLAMSALECVSHIRLPRVQYVNISECKSAISISGDYLPASLQYLEIFGCPELTISEQLQHKWLTEIKVEGCGSLTFPLGDLPNLKKLELSYCYSMEYVEVSHALPRLRYLNISCCHCLVSLPALGRAAPRLEDLRVHLCPKIDCFSEEWLPPSLKILYITECDKLASWMASRGLQSQGLTDLLLTRCKDVKSFPGEGCLPASLEFLQLWELHNLETLDCKGLHHLTSLKNLKINYCDKLENIIQEHLLPSIENIYIGKCPLTTKLEEMEHPRIQFVTGLLVPCLYLIIVDSVLNVGFEIARKCKPFRRYDK 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90799g00008 1244 PRINTS Disease resistance protein signature 1012 1028 - -
Stsc90799g00008 1244 PRINTS Disease resistance protein signature 266 280 - -
Stsc90799g00008 1244 PRINTS Disease resistance protein signature 193 208 - -
Stsc90799g00008 1244 PRINTS Disease resistance protein signature 364 378 - -
Stsc90799g00008 1244 Gene3D Ribonuclease Inhibitor 936 1210 IPR032675 -
Stsc90799g00008 1244 Gene3D - 15 115 - -
Stsc90799g00008 1244 PANTHER DISEASE RESISTANCE PROTEIN RP 68 898 IPR044974 GO:0006952
Stsc90799g00008 1244 Pfam Rx N-terminal domain 15 93 IPR041118 -
Stsc90799g00008 1244 FunFam Probable disease resistance protein At1g63360 413 498 - -
Stsc90799g00008 1244 SUPERFAMILY L domain-like 488 983 - -
Stsc90799g00008 1244 Pfam NB-ARC domain 168 413 IPR002182 GO:0043531
Stsc90799g00008 1244 FunFam Probable disease resistance protein At1g61300 151 320 - -
Stsc90799g00008 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 427 IPR027417 -
Stsc90799g00008 1244 SUPERFAMILY L domain-like 947 1200 - -
Stsc90799g00008 1244 Gene3D Ribonuclease Inhibitor 549 935 IPR032675 -
Stsc90799g00008 1244 Gene3D - 327 411 IPR042197 -
Stsc90799g00008 1244 Gene3D - 412 498 IPR036388 -
Stsc90799g00008 1244 Gene3D - 153 322 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90799g00008 Stsc-Chr90799 51910 56127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90799g00008 186 885 WRKY Transcription Factor Family AT5G45050 22.342 3.11e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90799g00008 - - ahf:112708719 1650.95