Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90799g00006 ATGTCTGCAAACCTTGAAGGTGGAGCTTATCTCTCTTCCTTTGTTGATGCTATTTCAAAGAAGCTGTCTTCAATACTTGAAAATGACTCAGTCTTCGAAGGAAATGACTCTGCCCTGGAGTTATTGCTTGAAAGGTTGGATGATTGTCTGTGTGATGTTGAACCTGTGCTTGATGATGCTGAGCTGAAGCAGTTCCATAACGAGAGAGTCAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATCTGGCTGATGACTTCCTTGATGAACTCTCCACTAAAGCTGCCATTGACCCTCCAAGGGATCCAGATAAACTTCGTCTGAAAGAGAGTGCCAAGGTGGACTTCTCGTCATGGAGAATTCCATCCACATCTCTTGTTGTTAGTTCTGACATATTTGGTCGGGACCAAGACAAGAAGAACATAATCAAATTTCTGTTAGATGATATCTGCACTGCTGAATCACCTGTCTCTGCTATTCCCATTGTGGGAATGGGTGGGATAGGTAAAACTACTCTTGCTCAACTTGTTTACAATGATACCAAAGTCGTGGGAAAATTTGGCACTAGAGCATGGGTCTGTGTTGCTGAAAATTCTGACCCTGTTAATGTTACAAGCACAATAATAGAGGCAATAGATTCTTGTCCCTGTAACATGAATAATTTTGATTCACTTCAGACCGAATTGAAAAGAAAATTGACAGGAAAGACATCTTTAGTCGTTTTAGATGATGTCTGGCATGATGAACGAGACATGTGGGAGAATTTTCTAAAACCTTTTCAATATGGAAATGATGGAAGTAAGATTCTCCTAACAACCCGGAGTGAAAAGGTTGCTTCTGTGTTCGCAGATACTAATCTTCACTATGCACTAAATTTATTGTCAGAGGAAAATTGTTGGTTAGTGTTTTTGAAGCATTCATCTATTTCTACTAATTCTAAAGAATATGAAACTCTAGAACCAATTGGTAGAAAAATTATTGAAAAGTGTAAGGGGTTACCTTTGGCTGTCAAGACACTTGGGGGGTTATTGCGCAATAAATATAATGAAGGGGATTGGGAAAATATACTTCAAAGTGAAATTTGGGAACTCTCTGAAGATAAGAGTAAGATTGTTCCTGCGTTAAGAGTTAGTTATCATTACCTCCCTTCACATTTGAAGCGTTGTTTTGTTTACTGCTCACTTTATCCTGAAGATTATCAATTCGACAAAGGCGAATTGATTTTACTATGGATGGCTGAAGATCTTGTACAACCAAAGGAAAACGACACACTAGAAAACATTGGTTGTGCATATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAACCTTTTAGTAAGAATGGAAAATTATTTGTAATGCATGATCTAGCAACGTTTTTTGCTGGAAAATTCTATTTCAAAGTCAAACAATTTGATGATCCACACAAAATAGATAGCAAAACTCGTCATTTTTCATGTTCTAAAATTTATGTGAATTCCACCAAATTATTTCAAGAGCCCTATATTGGGGCAGTACGCATGAGAACATTTTTAGATTGGACTTGCCCTTTCCATCGATCCTCAGTTGATATTGAAAGTGATTCTCGGCTCTTACAACAACAATTGAGGTGTTTAAGAGCTTTTTCATCTAGCATCTTCACAAAATTGCCTGATTCAATAATAAGTGAATTGATTCATTTGCGTTATTTGAATCTCTCTAACACACCTATTGTGAGTTTGTCTGAGTCAATATGTAAATTATACAATCTCCAAACTTTGAAGTTGAGGAATTGTGATAAGCTAGAAATGCTTCCCAACAGCAAGATCTTGTGA 1815 0.3719 MSANLEGGAYLSSFVDAISKKLSSILENDSVFEGNDSALELLLERLDDCLCDVEPVLDDAELKQFHNERVKKWLVDLQDALYLADDFLDELSTKAAIDPPRDPDKLRLKESAKVDFSSWRIPSTSLVVSSDIFGRDQDKKNIIKFLLDDICTAESPVSAIPIVGMGGIGKTTLAQLVYNDTKVVGKFGTRAWVCVAENSDPVNVTSTIIEAIDSCPCNMNNFDSLQTELKRKLTGKTSLVVLDDVWHDERDMWENFLKPFQYGNDGSKILLTTRSEKVASVFADTNLHYALNLLSEENCWLVFLKHSSISTNSKEYETLEPIGRKIIEKCKGLPLAVKTLGGLLRNKYNEGDWENILQSEIWELSEDKSKIVPALRVSYHYLPSHLKRCFVYCSLYPEDYQFDKGELILLWMAEDLVQPKENDTLENIGCAYFDELVARSFFQPFSKNGKLFVMHDLATFFAGKFYFKVKQFDDPHKIDSKTRHFSCSKIYVNSTKLFQEPYIGAVRMRTFLDWTCPFHRSSVDIESDSRLLQQQLRCLRAFSSSIFTKLPDSIISELIHLRYLNLSNTPIVSLSESICKLYNLQTLKLRNCDKLEMLPNSKIL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90799g00006 604 FunFam Probable disease resistance protein At1g63360 379 462 - -
Stsc90799g00006 604 Gene3D - 378 464 IPR036388 -
Stsc90799g00006 604 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 393 IPR027417 -
Stsc90799g00006 604 Gene3D - 116 286 IPR027417 -
Stsc90799g00006 604 Gene3D - 15 115 - -
Stsc90799g00006 604 Gene3D Ribonuclease Inhibitor 522 603 IPR032675 -
Stsc90799g00006 604 Pfam NB-ARC domain 137 379 IPR002182 GO:0043531
Stsc90799g00006 604 Pfam Rx N-terminal domain 14 96 IPR041118 -
Stsc90799g00006 604 Gene3D - 293 377 IPR042197 -
Stsc90799g00006 604 PRINTS Disease resistance protein signature 159 174 - -
Stsc90799g00006 604 PRINTS Disease resistance protein signature 330 344 - -
Stsc90799g00006 604 PRINTS Disease resistance protein signature 232 246 - -
Stsc90799g00006 604 PRINTS Disease resistance protein signature 579 595 - -
Stsc90799g00006 604 PANTHER DISEASE RESISTANCE PROTEIN RP 45 599 IPR044974 GO:0006952
Stsc90799g00006 604 SUPERFAMILY RNI-like 525 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90799g00006 Stsc-Chr90799 35591 37513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90799g00006 157 354 WRKY Transcription Factor Family AT5G45050 26.108 8.54e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90799g00006 - - ahf:112708719 877.085