Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90799g00003 ATGGCAAAGATGATCGCGAATTCTCTTTTGCTACTGCTTGGAGCTCTTTCTTTCATAGCAAGAATCCAAGGCCAGGATCAATCAGGATTCATTAGCATAGATTGTGGACTACCTGAAAATTCCAGCTACACTGAGAAGAACACAGGAATCAATTACATTTCAGATGCTAAGTTCATTGATTCTGGTGTGACTAAGACTGTGTCTGCCCAAGATAAGGCTACTCATCAACAATATTTTAGTTACCTTCGGAGTTTTCCTTACGGAACAAGAAACTGTTACAGAATAAATGTAACAAGTGTTACAAGATATTTAATCAGAGCTAGTTTCTTGTATGGAAACTATGATGGTCTTAATAAGCTCCCACAGTTTGATCTTTATCTTGGAGTTCATTATTGGGAGACAGTGAAATTCACAAATTCATCAGTGAGCATAAACTATGAGATCATCCACACTCTAACGCTGGATTATATCCATATCTGTATGGTTAACAAAGGGACGGGGACGCCATTCATTTCAGTCATAGAAATGAGGATTTTGAACAATGTCAACATTACTTATACCACTCCAGACCCATCTACGTCATTGGCACGTTTCCGAAGGTATAAAGATGATCCATATGACCGGATATGGGAGCCTTATTGGGACGACGAGTGGACAGAATTAAGCGGCAGACTTAGCAATGATGATTTTTCTCAGAATGACTTTAAACCACCCGCAGTTGTGTTGGAGACTGCAGCTACACCAATAAATCCTACTGCCTCATTAGACTTCCACTGGGAGGATGATGGTGATGCAGATAATAATGAAACTCACCACCAATACTTTTTCTACTTACACTTCTTAGAGCTTCAGAAGCTGCCTGCAAATCAAACAAGATCATTCAAAATCACCATAAATGGCATTTCTGGGGACAATGTGGAACTCATATATGCTGACGTAATCACGCGCCATAGGCTACGCCCTCCGTATGGACTCAAAAAGAATCGCATTTCACTTTTTCGGTCAGAATCTGACTCCCTTCCGCCCATCATCAATGCTCTTGAGATTTATTTAGCCAAAGATTTCTCATCACAGATAGACACCCAAAAAGATGACGCGGATGCAATCACAAACATCAAGAGGGCTTATAGGGTGGACAGCAGAAACTGGCAAGGAGATCCATGTGCCCCCGAGGCGTACAAGTGGCAAGGTGTAGAGTGTAGCCCTTTTGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTCACCGAACGTATAGCAGCTGATATCTCCAAGCTTGCCATGTTAAAGTCCTTAGACTTATCAGACAATGGGTTAAGTGGGATTATACCTTCTTTTCTGGAACAACTGCAATCACTAGAATACTTAAACTTGGCGAACAACAACCTAACAGGTTCAGTTTCAAATGAACTCCTTCAAAAACAAAGTGATGGTGTATTATCCTTGAGGGATATTGCTGCTTCTATTGATTGCAGCAGCAATTATAATCTTTTGCCAAAGAAAGAAGCAATATGCTTTGACAAGATTCTTGGGAGAGGTGGATTCGGAACAGTTTACCATGGCTTTATTGAAGACATTCAAGTTGCTGTCAAGATGCTTTCACTATCATCGGTTCAAGGATATCAACAATTTGTTGCAGAGGTTAAGCTTCTAATGAGAGTTCATCACCGAAATCTCACTTCTCTTATTGGTTATTGCAATGAAGAGACAAATATTGGACTCATCTATGAATACATGGCAAATGGAAACTTAGATGAACATCTTTCAGGAAAAACCAATAGGGGAAAGCCCCTGAATTGGGAAGATAGACTTCGAATAGCATTGGATGCAGCCCAAGGACTGGAATACTTGCATAATGGCTGTAAGCCACCTATAATCCATAGAGATGTAAAATGCACAAATATTCTGTTAAATGAAAACTTCCATGCCAAACTGTCTGATTTTGGATTATCCAAATGCTTTGCGGCGGAGGGTGATACGCATGTGTCGACAATTGTGGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAACAGATTGACAGAGAAAAGTGATGTGTATAGTTTTGGAGTAGTTTTTTTAAGGATAATCACAGGTCAATCAGTGATAATAGGAAGGGAAGACATGACTCATCATATAAGTCAGCGGGTTAAGTCCATGCTTGCTGAAGGAGATATAACAAAAGTTGTTGACTCAAGGTTACAAGGAAACTTTGACAGTAACACTGCATGGAGAGCAGTTGAAATTGCAATGGCTGCTGTGTGTGCCATATCGGTGGAAAGGCCATACATGAGTGATATCGTGAAAGAGCTAAAGGAGTGTTTGGCTGCAGAGTTAGCTCGAAAACATAATAGCTGTGTCCTTCAAAATAAAGATTTATCTGAGCAGGTCAGTGTGAATTTGATTAGTACTGATATGACTCCCTTAGCTAGGTAG 2457 0.4042 MAKMIANSLLLLLGALSFIARIQGQDQSGFISIDCGLPENSSYTEKNTGINYISDAKFIDSGVTKTVSAQDKATHQQYFSYLRSFPYGTRNCYRINVTSVTRYLIRASFLYGNYDGLNKLPQFDLYLGVHYWETVKFTNSSVSINYEIIHTLTLDYIHICMVNKGTGTPFISVIEMRILNNVNITYTTPDPSTSLARFRRYKDDPYDRIWEPYWDDEWTELSGRLSNDDFSQNDFKPPAVVLETAATPINPTASLDFHWEDDGDADNNETHHQYFFYLHFLELQKLPANQTRSFKITINGISGDNVELIYADVITRHRLRPPYGLKKNRISLFRSESDSLPPIINALEIYLAKDFSSQIDTQKDDADAITNIKRAYRVDSRNWQGDPCAPEAYKWQGVECSPFDGFLRITSLNLSSSGLTERIAADISKLAMLKSLDLSDNGLSGIIPSFLEQLQSLEYLNLANNNLTGSVSNELLQKQSDGVLSLRDIAASIDCSSNYNLLPKKEAICFDKILGRGGFGTVYHGFIEDIQVAVKMLSLSSVQGYQQFVAEVKLLMRVHHRNLTSLIGYCNEETNIGLIYEYMANGNLDEHLSGKTNRGKPLNWEDRLRIALDAAQGLEYLHNGCKPPIIHRDVKCTNILLNENFHAKLSDFGLSKCFAAEGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVFLRIITGQSVIIGREDMTHHISQRVKSMLAEGDITKVVDSRLQGNFDSNTAWRAVEIAMAAVCAISVERPYMSDIVKELKECLAAELARKHNSCVLQNKDLSEQVSVNLISTDMTPLAR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90799g00003 818 ProSitePatterns Protein kinases ATP-binding region signature. 514 535 IPR017441 GO:0005524
Stsc90799g00003 818 ProSiteProfiles Leucine-rich repeat profile. 456 478 IPR001611 GO:0005515
Stsc90799g00003 818 SUPERFAMILY Protein kinase-like (PK-like) 504 778 IPR011009 -
Stsc90799g00003 818 PRINTS Leucine-rich repeat signature 433 446 - -
Stsc90799g00003 818 PRINTS Leucine-rich repeat signature 454 467 - -
Stsc90799g00003 818 Pfam Malectin-like domain 33 350 IPR024788 -
Stsc90799g00003 818 FunFam Leucine-rich repeat receptor-like kinase 364 487 - -
Stsc90799g00003 818 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 583 791 - -
Stsc90799g00003 818 Gene3D Phosphorylase Kinase; domain 1 514 583 - -
Stsc90799g00003 818 Gene3D Ribonuclease Inhibitor 365 484 IPR032675 -
Stsc90799g00003 818 Pfam Protein tyrosine and serine/threonine kinase 510 752 IPR001245 GO:0004672|GO:0006468
Stsc90799g00003 818 Pfam Leucine rich repeat 433 469 IPR001611 GO:0005515
Stsc90799g00003 818 ProSiteProfiles Protein kinase domain profile. 508 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90799g00003 818 Gene3D Transferase(Phosphotransferase) domain 1 584 804 - -
Stsc90799g00003 818 SMART serkin_6 508 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90799g00003 818 SUPERFAMILY L domain-like 392 476 - -
Stsc90799g00003 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Stsc90799g00003 818 PANTHER OS07G0107800 PROTEIN-RELATED 31 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90799g00003 Stsc-Chr90799 19531 23977 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90799g00003 3 790 Receptor kinase-like Gene Family AT1G51880 43.728 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc90799g00003 Malectin_like 3.3e-91 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90799g00003 - - adu:107464112 934.48