Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90799g00001 ATGAAAATTAAACCAGATGCTGCTAAGAACATTTCAGAATTATTGGAATCTAAGCAACGACAATATTCACTTGATGAGATTGTGAAGATCACCAACAACTTTGATAGGATTCTTGGGAGAGGTGGATTTGGAACAGTTTACCATGGCTTTATTGAGAACAATCAAGTGGCTGTCAAGATGCTTTCTCTATCGTCATCAGTGCATGGATATCAGCAATTTGTTGCAGAGGCAAGAGAAAACAATGGGGAGAAGTGCTTGAACTGGGAAGATAGACTTCGAATAGCATTGAATGCAGCCCAAGGATTGGAATATCTACATAATGGTTGTAAGCCACCTATAATCCACAGAGATGTAAAATGCACAAATATTCTATTAGATGAAAACTTCCATGCCAAACTAGCTGATTTTGGATTATCCAAATGCTTTGCTGCTGACGGCGATACACATGTGTCAACAATTGTGGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACGACATCAAACAGATTAACGGGGAAAAGTGATGTGTATAGTTTTGGGGTAGTTCTTTTAAGGATAATCACAGGTCAAGCAGTGATAATAATAGGAATGGAAGACATGGCTAGCCATATAAGTCAGCGGGTTAAGTCCATGGTTGATGAAGGAGATATAACAAAAGTTGTTGACTCAAGATTACAAGGAGATTTTGACAGTAACTCTGCATGGAGAGCGGTTGAAATTGCAGTGGCCTCTGTGTCTGCCATTTCAGCAGAAAGGCCATACATGAGTGATATAGTGAAAGAGTTAAAGGAGTGTTTGGCTGCAGAGTTAGCTCGAAAACATAACACTTGTGAACTTCAAAATGAAGATTTAGTTAGGGAGTCTATAACACATAGGGGTGGCAAAGCGGGTAGCCCGCCCCGCCAAAGCCTGCAAAAAAGCGTGGCGGAGCAGGTCGGAAATGTTTCGCGAGTTTAA 960 0.4135 MKIKPDAAKNISELLESKQRQYSLDEIVKITNNFDRILGRGGFGTVYHGFIENNQVAVKMLSLSSSVHGYQQFVAEARENNGEKCLNWEDRLRIALNAAQGLEYLHNGCKPPIIHRDVKCTNILLDENFHAKLADFGLSKCFAADGDTHVSTIVAGTPGYLDPEYTTSNRLTGKSDVYSFGVVLLRIITGQAVIIIGMEDMASHISQRVKSMVDEGDITKVVDSRLQGDFDSNSAWRAVEIAVASVSAISAERPYMSDIVKELKECLAAELARKHNTCELQNEDLVRESITHRGGKAGSPPRQSLQKSVAEQVGNVSRV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90799g00001 319 Gene3D Phosphorylase Kinase; domain 1 14 75 - -
Stsc90799g00001 319 PANTHER OS07G0107800 PROTEIN-RELATED 17 267 - -
Stsc90799g00001 319 MobiDBLite consensus disorder prediction 292 319 - -
Stsc90799g00001 319 SUPERFAMILY Protein kinase-like (PK-like) 15 263 IPR011009 -
Stsc90799g00001 319 Coils Coil 268 288 - -
Stsc90799g00001 319 ProSitePatterns Protein kinases ATP-binding region signature. 38 59 IPR017441 GO:0005524
Stsc90799g00001 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 113 125 IPR008271 GO:0004672|GO:0006468
Stsc90799g00001 319 MobiDBLite consensus disorder prediction 301 319 - -
Stsc90799g00001 319 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 59 276 - -
Stsc90799g00001 319 SMART serkin_6 32 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90799g00001 319 Gene3D Transferase(Phosphotransferase) domain 1 76 290 - -
Stsc90799g00001 319 ProSiteProfiles Protein kinase domain profile. 1 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90799g00001 319 Pfam Protein kinase domain 89 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90799g00001 Stsc-Chr90799 1105 3176 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90799g00001 17 286 Receptor kinase-like Gene Family AT1G51880 49.355 1.79e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc90799g00001 Pkinase 1.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90799g00001 - - adu:107464157 437.573