Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90797g00009 ATGTTATTATCGGCTTCGCCATCTTCTGTGGCCAAGAGCTCTCTGGAAGAGATGCTCGATTCTCTTCGCCGGAGAGAGGAAGAGGAAGCAAAGCCGAAGGACATGCCTCCAGCATTGCCGGCACGGCCGGCCTCCCGTGCACGACTGCCTCCGGCGAGGCGGTCTTTGCCGAATAACTTTACAGGCGGAGACTGCGGTGAGGCTGCGCCGGAGTTCTTGCCGAATGGATTTGATTGTAAGAGGAAGGAAGATGAACTGGGAGAGAAGAGAACAAGAGATGGTTGTAGGAGCAAGAAGGTGAAGATGATGATGGATGCGGATTCCCTTATCAAAAAGCTTTGTGTCTGGTGTAGACAACCAAGTGGGCAGTGGGAACTGGGTACGATACAGTCGACTTCGGGAGAGGAAGTATCAGTTTCACTCTCAAATGGAAATGTTATTAAAGTGGCCAGATCAGAGTTTGTACCAGCTAATCCTAAAATATTTGAGGGTGTAGATGATCTTATGAAGCTCGGTTATTTGAACGAGCCATCAGTTCTTCACAATATTAAGTTGAGATATTCCCAGGATATGATTTATACTAAAGCAGGGCGTGTTTTAATTGCAGTCAATCCCTTCAAAGATCTCCAGATTTTTGGAAATGATCATGTCTCAGCTTATAGGCAGAAGCTTACCAATAGTCCTCATGTTTTTGCTGTGGCTGAAGAGGCTTTTACAGAGATGATGAGAGATGAAGCAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAGACAGCAAAGATTGTTATGCAGTACTTAGCTGCTCTTGGTGGTAGCAATAGGGATATAGAAGATAAAATTCTTCAAACGAATCATGTGCTAGAAGCTTTCGGGAATGCAAAAACATCTAGGAATGAAAACTCTAGCAGATTTGGGAAGCTGATGGAAATTCATTTCAGCACAATGGGTAAAATCTATGGGGCTAAAGTTCAAACATTTTTGTTAGAAAAGTCAAGAGTTGTTCAGCTGGCCAGTAGTGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATTTGGCCTTAAAGAGAGACTTAATCTTAGAGCAGCCAGCTATTATAAATATCTTAATCAGAGTGAATGCTTGATGATTGATGGCATTGATGATGCTAAAAAATTTCATCAGCTGATGAAAGCACTTGATATTGTTCAAATTTGCAAAGAGGACCGAGAGCTGATCTTTACGGTGCTGGCTGCTATACTATGGCTGGGAAATATATCTTTCAAAGTTGCAGACAGTGAAAATCACATTGAGGTTCTGGATGATGAAGCTGTTACCAGTGCTGCTCGGCTGATGGGTTGCAGCACCCAGGCATTGAAGGCAGCATTATGTAATCAGAAAATCCAGTCTGAGAAGGATACTAATGCGAAAAAGTTAATATTGCAGCAGGCAATTCATACGAGAGACAAAATTGCAACATTTATGTATGAAAACTTGTTTAACTGGATTGTAGACCAAGTCAACAAGTCACTTCAAGTGGGTAAAAAACATACTGGGAAATCCATAAATATCTTGGATATTAATGGTTTTGAATCATTCCAGAAAAATAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAAAGACTTCAACAGCATCTCATTCGGCATCTGTTTAAGTATGAGCAGGAGGACTATGAGTCAGATGGCATTGAGTGGACTAGAATAGATTTTAAGGACAATCAAGAGTGCCTGAATCTCTTTGAGAAGAAATCTCACAGTCTACTCTCCTTGTTGGATGAGGAATCAAATTTGCCAAAGGCATCTGATCTAACATTTGCAAACAAACTTAAGCAGCACCTGGGGACTAATCCTTGCTTCAAAGGGGAGAGAGGCAGGGCTTTCAGTGTTCGTCATTATGAAGGGGAGGTTCTGTATGATACAAATGGATTTCTAGAAAAGAACAGAGATACTATGGCTTCTGATTCTATTCAATTCCTCGCATCATGCAAATGTGAACTGCTGCCATTGTTCTCCAAAACGTTTTACCAATCTCTGAAGTGTTCAAATTCCTTAAGCACAGGTGCACTGGATTCACAGGAGCAGAGTGTCTGCCAAAAGTTTAAGGGTCAATTATTTAATTTGATGAACCAGTTGGAGTGCACCACGCCCCACTTTATTCGATCCATAAGGCCAAATACTAAGCAGCTGCCTGATATTTATGATGAAGGCCTTGTCCTACAACAGCTCAAGTGTAGTGGGATTCTTGAGGTTGTTAGAATTTCAAGGGCTGGATATCCAACTCGGATGACGCATCAAGAGTTTTGCACAAGGTATGGGTTTCTGCTTTCTGAGACCAACAAATCTCAAGATCCATTGAGCACTTCAACTGATTCACTTGAGCTCAAGAGAAAACAGGTTTTGCAAGGAACAGTTGTGCTTCAAAAATACTTCCGTGGTTATCAAGCACGGAGTTATTTCCAGGAACTTAAGAGTGGAGTGGCAACATTACAATCATTTGTTCGTGGAGAAATTACAAGAAGAAAATTTGGTGTTATGATGAAGCCTTCTATAACAATTTATTCTAAAAATCTTGAGGAGATCCAAGCTATCATACAACTGCAATCTGTAATTCGTGGGTGGCTGGCTCGTAAGGATGCAAGTACACCAAATGGTTTTAAGAGTTATCCTGAAAATGCAAAACATAGGCGGAAGCCACTTGTTAAGATTCTAGAAGTAAAGGATATATCCAAAGAGCGGGTTCAGAATCTACCTTCACCATTAGCCCAGCTACAAAGGCAGGTTGACAAGGCTGAAGAGGAAAATGCTAAATTAAGGGAACAGCTAAAACAATCTGAGAGAAAGTGGGCTGAATATGAGGCGAAGATGAAATCAATGGAGGAAGCATGCCAAAAACAGAGAGCATCTTTGCAAATGAGTCTTGTTGCAGCTAGGAAGAGCCTTGCTTCTGATAGTGACAATACTCAATCTACAAGAAATGAAGTCCTGTCTCCTCGGTACTATGGTTCTGAAGATGCTAATGTGGGACCTCGAACAACTGCTGCAAACACTCCGATAAAGTTTTCTAGCAATTTTGCTGTCTCTGATGGAGGCAGAGAGGCTAATGGAATGAGAGAGAGAGGGACAAATGGTACTTTGGGCAGTCTGATGAAGGAATTCGACCAGCGAAGGCAGAACTTTGACGACGAAATTAAAGCTCTGAATGAGGTTAAACCAGGGAACTTGACCACCACGAATTCCATTGAAGAATTTCGTAAGCTCAAGCTCAGTTTTGAGGGATGGAAGAAACAATACAAGGTTAGGTTACGTGAGACAAAAGCAAAGCTTCATGAAGCGGATAAAAGTCGGAGGACTTGGTGGGGGAAATTAATAAATTGA 3402 0.415 MLLSASPSSVAKSSLEEMLDSLRRREEEEAKPKDMPPALPARPASRARLPPARRSLPNNFTGGDCGEAAPEFLPNGFDCKRKEDELGEKRTRDGCRSKKVKMMMDADSLIKKLCVWCRQPSGQWELGTIQSTSGEEVSVSLSNGNVIKVARSEFVPANPKIFEGVDDLMKLGYLNEPSVLHNIKLRYSQDMIYTKAGRVLIAVNPFKDLQIFGNDHVSAYRQKLTNSPHVFAVAEEAFTEMMRDEANQSIIISGESGSGKTETAKIVMQYLAALGGSNRDIEDKILQTNHVLEAFGNAKTSRNENSSRFGKLMEIHFSTMGKIYGAKVQTFLLEKSRVVQLASSERSYHIFYQLCAGSSFGLKERLNLRAASYYKYLNQSECLMIDGIDDAKKFHQLMKALDIVQICKEDRELIFTVLAAILWLGNISFKVADSENHIEVLDDEAVTSAARLMGCSTQALKAALCNQKIQSEKDTNAKKLILQQAIHTRDKIATFMYENLFNWIVDQVNKSLQVGKKHTGKSINILDINGFESFQKNSFEQFCINYANERLQQHLIRHLFKYEQEDYESDGIEWTRIDFKDNQECLNLFEKKSHSLLSLLDEESNLPKASDLTFANKLKQHLGTNPCFKGERGRAFSVRHYEGEVLYDTNGFLEKNRDTMASDSIQFLASCKCELLPLFSKTFYQSLKCSNSLSTGALDSQEQSVCQKFKGQLFNLMNQLECTTPHFIRSIRPNTKQLPDIYDEGLVLQQLKCSGILEVVRISRAGYPTRMTHQEFCTRYGFLLSETNKSQDPLSTSTDSLELKRKQVLQGTVVLQKYFRGYQARSYFQELKSGVATLQSFVRGEITRRKFGVMMKPSITIYSKNLEEIQAIIQLQSVIRGWLARKDASTPNGFKSYPENAKHRRKPLVKILEVKDISKERVQNLPSPLAQLQRQVDKAEEENAKLREQLKQSERKWAEYEAKMKSMEEACQKQRASLQMSLVAARKSLASDSDNTQSTRNEVLSPRYYGSEDANVGPRTTAANTPIKFSSNFAVSDGGREANGMRERGTNGTLGSLMKEFDQRRQNFDDEIKALNEVKPGNLTTTNSIEEFRKLKLSFEGWKKQYKVRLRETKAKLHEADKSRRTWWGKLIN 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90797g00009 1133 MobiDBLite consensus disorder prediction 1 15 - -
Stsc90797g00009 1133 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 110 159 IPR004009 GO:0003774|GO:0005524|GO:0016459
Stsc90797g00009 1133 ProSiteProfiles IQ motif profile. 810 837 IPR000048 GO:0005515
Stsc90797g00009 1133 CDD MYSc_Myo8 177 797 IPR036022 -
Stsc90797g00009 1133 SMART MYSc_2a 157 834 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc90797g00009 1133 MobiDBLite consensus disorder prediction 1 64 - -
Stsc90797g00009 1133 FunFam Myosin heavy chain 346 402 - -
Stsc90797g00009 1133 PANTHER MYOSIN 157 1123 - -
Stsc90797g00009 1133 Gene3D - 815 858 - -
Stsc90797g00009 1133 ProSiteProfiles IQ motif profile. 868 896 IPR000048 GO:0005515
Stsc90797g00009 1133 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Stsc90797g00009 1133 MobiDBLite consensus disorder prediction 17 35 - -
Stsc90797g00009 1133 Pfam Myosin head (motor domain) 165 796 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc90797g00009 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 887 IPR027417 -
Stsc90797g00009 1133 Gene3D Kinesin motor domain 162 766 IPR036961 -
Stsc90797g00009 1133 Pfam IQ calmodulin-binding motif 870 887 IPR000048 GO:0005515
Stsc90797g00009 1133 Pfam IQ calmodulin-binding motif 812 829 IPR000048 GO:0005515
Stsc90797g00009 1133 Gene3D Myosin VI head, motor domain, U50 subdomain 403 511 - -
Stsc90797g00009 1133 Gene3D - 534 723 - -
Stsc90797g00009 1133 Coils Coil 1132 1133 - -
Stsc90797g00009 1133 Coils Coil 1058 1078 - -
Stsc90797g00009 1133 Coils Coil 1103 1123 - -
Stsc90797g00009 1133 PRINTS Myosin heavy chain signature 193 212 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc90797g00009 1133 PRINTS Myosin heavy chain signature 247 272 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc90797g00009 1133 PRINTS Myosin heavy chain signature 522 550 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc90797g00009 1133 PRINTS Myosin heavy chain signature 290 317 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc90797g00009 1133 PRINTS Myosin heavy chain signature 575 603 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc90797g00009 1133 MobiDBLite consensus disorder prediction 989 1005 - -
Stsc90797g00009 1133 Coils Coil 929 970 - -
Stsc90797g00009 1133 Gene3D - 859 981 - -
Stsc90797g00009 1133 MobiDBLite consensus disorder prediction 989 1023 - -
Stsc90797g00009 1133 Gene3D - 767 814 - -
Stsc90797g00009 1133 ProSiteProfiles Myosin motor domain profile. 163 833 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc90797g00009 1133 SMART iq_5 830 852 IPR000048 GO:0005515
Stsc90797g00009 1133 SMART iq_5 807 829 IPR000048 GO:0005515
Stsc90797g00009 1133 SMART iq_5 867 889 IPR000048 GO:0005515
Stsc90797g00009 1133 Gene3D - 346 402 - -
Stsc90797g00009 1133 SMART AAA_5 246 428 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90797g00009 Stsc-Chr90797 48353 58482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90797g00009 1 1130 Myosins gene family AT5G54280 55.069 0.0 1270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90797g00009 K10357 - gmx:100801876 1432.16