Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90796g00012 CGATCTGGTAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGTGATGCCGGTCTTGTTAAGATGATTCCCACCAAGCCCATGGTTGTGGAGACCTTCTCCGAGTACCCACCACTTGGTCGTTTTGCAGTCAGGGACATGCGTCAAACCGTGGCTGTCGGGGTTATCAAGAATGTTGAGAAGAAGGACCCCTCAGGAGCCAAGGTCACCAAGGCTGCCCAGAAGAAGAAGTGA 237 0.5232 RSGKELEKEPKFLKNGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPSGAKVTKAAQKKK 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90796g00012 78 Pfam Elongation factor Tu C-terminal domain 2 60 IPR004160 -
Stsc90796g00012 78 FunFam Elongation factor 1-alpha 1 61 - -
Stsc90796g00012 78 Gene3D Translation factors 1 61 - -
Stsc90796g00012 78 PANTHER ELONGATION FACTOR 1 ALPHA 1 78 - -
Stsc90796g00012 78 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1 60 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90796g00012 Stsc-Chr90796 81562 82425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90796g00012 1 71 Eukaryotic Initiation Factors Gene Family AT1G07930 91.549 1.85e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90796g00012 K03231 - sly:101264700 154.451