Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90795g00003 ATGGGGAAAATGGGAACCCCATTTAAGGGAATAATTCAAGATGTCAAAGGAAGAGCTGAATGCTACAAGCAAGATTGGGTTTTGGGATTCTGTTCTGGTCTAAGATTATTGGCTCCAACATTCTACATATTCTTTGCTTCTGCACTCCCTGTCATTGCTTTTGGAGAACAACTAAGCAGAGACACAGATGGAAGCTTGAGCACTGTAGAAGCATTGGCATCTACTGCAATTTGTGGAATTATTCACTCTATAATTGGTGGCCAGCCTTTGTTGATTGTAGGAGTTGCTGAACCAACTGTTATAATGTACACTTATCTCTACAATTTCAGCAAGAAAACACCTCAACTTGGTTCAAAACTCTTTCTTCCGTGGGCTGGATGGGTTAATGTTTGGAGTGCATTGTTCTTGATTCTGCTTGGGATTTTTAATGCTTGCACTGTAATCACAAGGTTTACAAGAGTTGCCGGGGAGTTGTTCGGCATGCTAATTACTGTTCTTTTCTTTCAGCAGGCTATTAAGGGATTGGTTGAGGAGTTCAGCACGCCGAAGACTGAAAACCCATTGGCAGAAGAATTTCAATTCCAATGGAGGTACATTAATGGATTGCTTGGAATAATTTTCTCTTTTGGAGTACTTGTCACTTCCCTTAAAACCAGAAAAGCAAGAACATGGCTATATGGAACAAGGTGGCTACGAAGTTTTATTGCAGATTATGGGGTTCCATTGATGGTAGTGTTATGGACTGCACTGTCTTATGTTGTGCCTGGCAAAGTTCCGGAAGGTGTTCCTAGAAGGTTGGTTTCTCCGCTTCCATGGGAACCTGCATCTCTGTCTCACTGGACAGTAGTGAAGGACATGGGGCAGGTTCCCTTTATTTATATAATTGCGGCAATTATTCCGGCTTTGATGATAGCAGGACTATACTTTTTCGATCATAGTGTATCTTCCCAGATGGCTCAGCAGGAGGAGTTCAATCTTCAAAAGCCATCGGCCTACCACTACGACATGTTTCTGCTTGGAATAATGACTTTGATTTGCGGTCTCCTCGGCCTTCCTCCATCAAACGGAGTCATTCCACAGTCCCCCATGCATACAAAGAGTTTGGCAGTTCTAAGGAAGCAGTTGATAAAAAAGGAAGTGGTAAAAAGTGCCAAGGAATGCATTAAGCTGAAGAAGACAAAGTCCGAAATATATGGCACCATGCAGGCTGTCTTTGAAGAGATGGATACGGATCCTACTGCTAAAGAGTTGGAGAATTTGAAGGAAGCTGTAATGAACCCTGATGCCAAGGATGGAACAAAGAAAAATTTTGATCTTGAGGAACACATAGATGACTATCTACCGGTCCGGGTTAACGAGCAAAGAATGACCAACTTAATGCAGTCCCTTCTGATTGGCCTATCAGTTTTGGCCATCTCTGTTATCAAAAGGATACCCACCTCGGTTTTATGGGGATACTTCGCTTACATGGCAATTGATAGTCTACCAGGGAATCAGTTTTGGGAAAGGATATTGCTTCTCTTCATTGCTCCAAGACGACGATCTAGAATTTTGGAAGGTTCTCATGCCTCATTTGTGGAGACAGTACCATTCAAGACCATAGCTGCTTTTACAGCCTTCCAATTAGCATATTTTGCAATCTGTTATGGAATGACATGGATACCGACAGGCGGAATTTTGTTTCCACTACCATTCTTCCTTCTCATACTTGTAAGGGAGCACCTGCTTCCGAAGCTGTTCAAACCCCGTGATCTTCAAGAACTCGATGCCTCCGAATATGAGGAGATTCTTGGTGCTCCACGTGGTTCCCTTAGCATGTCACTGCAGGATAAGGAACCTGGCGACGGCGATGAGAGTGTAGAAGATTACTGTGATGCTGAGATCTTAGATGAGATGACAACTAGCAGAGGAGAGTTGAAACTCAGAGCTGTGAGCTTCAATGATGGAAACTGCAACAATGACGGAAACCGGAGTTTCAACTTTAGAAATCGCAGCTTCAATGTTAGAAATCGGCACAGCTTCAATGCTAGATACCGCCACAGCTTCAATGATAGATACCTACAAGGCTTCAATGGAAATGCTGTTTGA 2088 0.4301 MGKMGTPFKGIIQDVKGRAECYKQDWVLGFCSGLRLLAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVEALASTAICGIIHSIIGGQPLLIVGVAEPTVIMYTYLYNFSKKTPQLGSKLFLPWAGWVNVWSALFLILLGIFNACTVITRFTRVAGELFGMLITVLFFQQAIKGLVEEFSTPKTENPLAEEFQFQWRYINGLLGIIFSFGVLVTSLKTRKARTWLYGTRWLRSFIADYGVPLMVVLWTALSYVVPGKVPEGVPRRLVSPLPWEPASLSHWTVVKDMGQVPFIYIIAAIIPALMIAGLYFFDHSVSSQMAQQEEFNLQKPSAYHYDMFLLGIMTLICGLLGLPPSNGVIPQSPMHTKSLAVLRKQLIKKEVVKSAKECIKLKKTKSEIYGTMQAVFEEMDTDPTAKELENLKEAVMNPDAKDGTKKNFDLEEHIDDYLPVRVNEQRMTNLMQSLLIGLSVLAISVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFIAPRRRSRILEGSHASFVETVPFKTIAAFTAFQLAYFAICYGMTWIPTGGILFPLPFFLLILVREHLLPKLFKPRDLQELDASEYEEILGAPRGSLSMSLQDKEPGDGDESVEDYCDAEILDEMTTSRGELKLRAVSFNDGNCNNDGNRSFNFRNRSFNVRNRHSFNARYRHSFNDRYLQGFNGNAV 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90795g00003 695 PANTHER ANION EXCHANGE PROTEIN 3 596 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc90795g00003 695 Gene3D Helical hairpin bin 18 60 - -
Stsc90795g00003 695 Pfam HCO3- transporter family 202 374 IPR011531 GO:0006820|GO:0016020
Stsc90795g00003 695 Pfam HCO3- transporter family 7 184 IPR011531 GO:0006820|GO:0016020
Stsc90795g00003 695 Pfam HCO3- transporter family 449 539 IPR011531 GO:0006820|GO:0016020
Stsc90795g00003 695 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90795g00003 Stsc-Chr90795 25418 29159 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90795g00003 7 648 Antiporters AT5G25430 65.741 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90795g00003 K24194 - gmx:100787412 1048.5