Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90795g00001 ATGGGAGCTCCTTTTCAGGGTATTGTCAAAGATTTCAAAGGAAGAATAATATATTACAAACATGATTGGGCTTCTGCATTCTCTTCTGGTGCTAGAATATTCGCACCAACCTTCTACATATTCTTTGCCTCTGCCCTCCCTGTCATTGCTTTCGGGGAACAACTAACCAGAGACACAGAAGGAAGATTGAGCGCAGTAGAAGCATTGACATCAACTGCACTATGTGGAATAATCCATTCAATTTTTGGAGGACAACCTCTGCTGATTCTAGGAGTTGCTGAACCAACTGTTATAATGTATAGTTATCTTTACAAGTTCAGCATAAGCCTTCCTTCAATTGGCAAAGAACTCTTTCTGCCTTGGGCTGGATGGGTTTGTGTTTGGAGTGCACTGTTCTTGATTCTGCTTTCAATTTTTAATGCTTGCAATGTAATCACAAGGTTTACAAGAGTTGCAGGGGAGTTGTTTGGCATGCTAATTACAGTTCTATTCTTTCAAGAGGCTGTAAAGGGAGTAGTGGAGGAATTCAGGGAGCCAAAGGCAGAAAATGGAGAAGAACCTGAATTCTATTGGCACTACATAAATGGATTGTTTGCAGTGATTTTTGCATTTGGAGTTCTTCTAACTTCCCTGCAAACCAGGAAAGCAAGATCATGGCTATATGGAACAGGGTGGATGAGAAGCCTTCTTGCAGATTATGGTATTCCATTGATGGTTGTCTTATGGACAGCAGTGTCCTATGCTAAGCCAAGAGGTGTTCCTAAAAATGTTCCTAGAAGGTTGGATTCTCCACTTCCATGGGAGCCTCAATCTCTCTATCATTGGACCATATTAAAGGACATGGGAAAGGTGCCGATTCCTTACATATTCGCGGGGATTATTCCGGCTATCATGATAGCAGGATTATACTTTTTTGATCATAATGTTGCTTCACAAATGGCTCAACAACATGAAAACAATCTTCAAAAGCCATCTTCCTACCACTATGATATGTTTTTGCTTGGAATAATGACTCTGATCTGCGGTCTCCTTGGAGTTCCTCCATCAAATGGAGTCCTTCCTCAGTCTCCAATGCATACAAAAAGTTTGGCAGTTCTTAAGAAACAGTTGCTCCGAAAGAAAATGGTGAAAAGTGCCCGGGAATGCATTAGGATGAACAAGACCACTTCTGAAATATATGGAGAGATGCATGGTGTCCTCAAACAAATGGATGCTGAGCCTACCGCTAGAGAGTTGCAGAATTTGAGAGATGCTGTAATGAACCCTGAAAACAAGGATGGAAGTTTTGATCCTGAACACATAGATGAGCACCTACCAGTCAGGGTTAAGGAGCAAAGATTGTCCAACTTAATGCAGTCCGTTCTCATTGGCCTTTCCGTCTTAGCCATCTCTGTTATCAAGAGGATACCTACCTCCGTCTTATGGGGATATTTCGCTTACATGGCGATCGATAGTTTACCCGGAAATCAATTCTGGGAGAGGATATTACTCCTCTTCACCACCAAAAGCCGCCGTAACAGGCAAGTATATAATTTGTTACTCCTAATCTCGATTCTAAGATGGTACCACGTGTTCATGTTCACACTCTCCCTAGGTGTGAAAAGAGTGTGGACTCTTCAAAGTTTATAA 1629 0.4174 MGAPFQGIVKDFKGRIIYYKHDWASAFSSGARIFAPTFYIFFASALPVIAFGEQLTRDTEGRLSAVEALTSTALCGIIHSIFGGQPLLILGVAEPTVIMYSYLYKFSISLPSIGKELFLPWAGWVCVWSALFLILLSIFNACNVITRFTRVAGELFGMLITVLFFQEAVKGVVEEFREPKAENGEEPEFYWHYINGLFAVIFAFGVLLTSLQTRKARSWLYGTGWMRSLLADYGIPLMVVLWTAVSYAKPRGVPKNVPRRLDSPLPWEPQSLYHWTILKDMGKVPIPYIFAGIIPAIMIAGLYFFDHNVASQMAQQHENNLQKPSSYHYDMFLLGIMTLICGLLGVPPSNGVLPQSPMHTKSLAVLKKQLLRKKMVKSARECIRMNKTTSEIYGEMHGVLKQMDAEPTARELQNLRDAVMNPENKDGSFDPEHIDEHLPVRVKEQRLSNLMQSVLIGLSVLAISVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFTTKSRRNRQVYNLLLLISILRWYHVFMFTLSLGVKRVWTLQSL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90795g00001 542 Gene3D Helical hairpin bin 15 57 - -
Stsc90795g00001 542 PANTHER ANION EXCHANGE PROTEIN 2 526 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc90795g00001 542 Pfam HCO3- transporter family 197 369 IPR011531 GO:0006820|GO:0016020
Stsc90795g00001 542 Pfam HCO3- transporter family 4 180 IPR011531 GO:0006820|GO:0016020
Stsc90795g00001 542 Pfam HCO3- transporter family 440 510 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90795g00001 Stsc-Chr90795 3458 9011 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90795g00001 3 504 Antiporters AT5G25430 65.107 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90795g00001 K24194 - gmx:100792745 768.074