Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90792g00010 ATGTCTGGAATGCTCAGATGCGTGGAGTATGAGCTGTCGAAAACATTATCCGGTCTGCCCCGGCAGGCGCAGGCGCATCTAACAGCGAGGTTGCAGAGAGCATTAGAAATATTTGCATCATTGAAACCTCTCATTGAAGAGGCGGAAGTTGGACAACTATATGATATACGGGTGTGGCAGTGGAGGGGACGCATTGTGGAGATATGCTATGAAATGATGTGCGTATTGGACAAACTGAATCTGCAAGAGGTTGGAAGGGTACGCGTTTTTAGCCATGAGTTCTTTTTCTTGAATCCATTCCCACGTCATGAAAAGGGGATATATGAAATCATCAGCGGATTTGAAAAGCTAGAAAAGGAAGCAACTCAGCTCCCAATTTTACCTGTTATACTGGAGAACTGGGAAGTAAGTAGCGAGCAGCTGCAATTGGATCATTTGCTTCACTCTCCTGATAGATATGAACGAGATGAGAAAAAAGATAATGTGGTCAGCAAGTTATTTGTCAACCAAGAGGAGGAGGAGGATATTCGGTTCATTTCCATTGTAGGAGCAGCTGGAATAGGAAAGACCGCACTGGCCCAACTTGTTTGCAACGATGCTCAAGTGAAGGATTATTTTGATTACAGGGCACGGGTATTTGTCTCGGAAGAGCTCAATCTAAGAAAAATTGTCATGGCCATCCTAGGGCTTTCAACTTCTGACGTCAGGAAGGATGTTGAAATGGAATTACTGGTGCTCATGTTTCGTCGAGTTACTGCTGGAAAAAGATGTCTCTTTTTTCTGGATGAAGTAGCCAACGAAGATGCTGAGCGCTGGCAACTCATGAAGGAGTTTTTCAGTAATTTCTGTGTTGCGGGAAGTAGGATTTTGATCACCACACGGCATAATTCTGTTGCGGCATTGGCATCTGCACCGGAAGATATCATACGTCTGCGTCGCCTATCTGATGAGGAATCTTGGGAAGTTTTCCGGAGTAGTGCATTTGGTCCTTCAACTAACGCTGACTCCTGGAAACTTGAACTTTGCAGGGACATCACAAAGAAATGCCGTGGGGAGCCACTATATCTGAGATCTGTTGGTGGCATCATCCGTCACATACGCAGCAGTGACAGCACCTCCTTGTTACAATTGCTAACGATATTGGAACGTCAGACATGGGAGGGAGCACAAGAAATTCAAGTGGGGCCTTTATTGATGTTTCTCCATTTTCAATTCCCCCGTTATTGGAAACAATGCTTATTCTATTGTTCCATATTTCCTAAGGATCACGTAATAGTTATAGACCAACTTATCCAATTGTGGATAGCACAGGGTTTTGTTATCTCTGATGATCATGATGACAATCACGTGGAAGAACAAGGCCGGAGAATCTTCATTGCATTGTCAGGCTATCCCATCTTCAAACATAACACAATAGCTGCTACTCCGGGTTCCACATGCCTATTAGAGAGCAGAATCTCCGATCTCTTACACGCTATGGCAAAGAACGAATATAGCACAATGCTTCTTGAGAGTGGGGAGAAATTTAGAGAGGATGGTGATGTTCCCATATATTGTCGCCATTGCACTCTAACTATTGCTACTCACACTTGTTTACCAAAGTCCATTCCAAATGCTGAGAAACTCCACACTTTGATGATTTTGTCTCAGTATTCCTCAGTAGATGCAACAAACCTTTCTAGTCTTCTAAGTAATTTGAGCAAGGTCAGGGCACTCATCTTGAGCTCTTGTTCCATACAAGAACTTCCAACAAGGGTAGGGAAACTGTTTCATCTGAGATACCTTGACTTGTCTTTCAATCCTGATTTAAAGCGCTTGCCTGGAGCAATATGCAATCTGCTTTATCTTCAAACTTTGAATCTCAATGGATGTCATAGTCTTCGCAAACTACCCAAAGGTATTGGAAAGTTGATCAAGCTACGACATCTTGAGATTCTCTGGACAACCAGTCTCACTTACTTACCAAAAGGGATAGCTTGCTTAACATCACTCAGGACCTTAAGCCGTTTCATTGGGAATTCTCTTGTTGGAAGCAAATCCTGCAACATTGGAGACTTGGAAAATCTGAACAATATCCAAGGGAATATTACCATAGATGGGTTGGGAGCTGAAACTGATGCTTCTGAAGCTGAAAGAGCAGGTCTAGAGAATAAAAAAGGTTTGCGTGGCTTAGAACTGTGGTTTACTGCTCCAGGAGCAGGAACTAACGATGAAAGGGTACTTGGAGCTTTGAAAGCACCTTCTGAATTGGAAGATCTAGGTATATTTTACTACAGAGGAGAGTTGTTCCCTGCTTGGATGATAACACTGCAGAAGTTGACACATCTAACGCTTGCTGATTGTGACAAATGCAGTGTTCTTCCCTGGCTTGCAGAACTTCCATCCCTTGAATCACTTAAAATAATGAATATGCCCAGTGTAAAGAAGGTTGTGGATTCTGAATTTCTGGGAGCAGGATCAACTGTTGCATTTCCAAAGCTAGACAAACTTTCCTTTGAGAATCTGGGTAATTGGGAGGAGTGGGTTGGACTAGCTGATGATGGCGACCAAGCAAATTTTATGCCTATGCTTTCTTCTTTGTCAATTGTAAACTGCAGAAAGCTAAAGGCAATTCCGAACTACATAAAGCTGAAGAAAAATGAGAAGCCTGGGTTTCGCATTAACATTAAAAAATGTCCTTCTCTTGATCAAACACAGCATGAGTAA 2706 0.4272 MSGMLRCVEYELSKTLSGLPRQAQAHLTARLQRALEIFASLKPLIEEAEVGQLYDIRVWQWRGRIVEICYEMMCVLDKLNLQEVGRVRVFSHEFFFLNPFPRHEKGIYEIISGFEKLEKEATQLPILPVILENWEVSSEQLQLDHLLHSPDRYERDEKKDNVVSKLFVNQEEEEDIRFISIVGAAGIGKTALAQLVCNDAQVKDYFDYRARVFVSEELNLRKIVMAILGLSTSDVRKDVEMELLVLMFRRVTAGKRCLFFLDEVANEDAERWQLMKEFFSNFCVAGSRILITTRHNSVAALASAPEDIIRLRRLSDEESWEVFRSSAFGPSTNADSWKLELCRDITKKCRGEPLYLRSVGGIIRHIRSSDSTSLLQLLTILERQTWEGAQEIQVGPLLMFLHFQFPRYWKQCLFYCSIFPKDHVIVIDQLIQLWIAQGFVISDDHDDNHVEEQGRRIFIALSGYPIFKHNTIAATPGSTCLLESRISDLLHAMAKNEYSTMLLESGEKFREDGDVPIYCRHCTLTIATHTCLPKSIPNAEKLHTLMILSQYSSVDATNLSSLLSNLSKVRALILSSCSIQELPTRVGKLFHLRYLDLSFNPDLKRLPGAICNLLYLQTLNLNGCHSLRKLPKGIGKLIKLRHLEILWTTSLTYLPKGIACLTSLRTLSRFIGNSLVGSKSCNIGDLENLNNIQGNITIDGLGAETDASEAERAGLENKKGLRGLELWFTAPGAGTNDERVLGALKAPSELEDLGIFYYRGELFPAWMITLQKLTHLTLADCDKCSVLPWLAELPSLESLKIMNMPSVKKVVDSEFLGAGSTVAFPKLDKLSFENLGNWEEWVGLADDGDQANFMPMLSSLSIVNCRKLKAIPNYIKLKKNEKPGFRINIKKCPSLDQTQHE 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90792g00010 901 Gene3D - 313 393 IPR042197 -
Stsc90792g00010 901 PANTHER DISEASE RESISTANCE PROTEIN RP 41 866 IPR044974 GO:0006952
Stsc90792g00010 901 SUPERFAMILY L domain-like 519 878 - -
Stsc90792g00010 901 Gene3D - 134 310 IPR027417 -
Stsc90792g00010 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 416 IPR027417 -
Stsc90792g00010 901 Gene3D Ribonuclease Inhibitor 510 900 IPR032675 -
Stsc90792g00010 901 PRINTS Disease resistance protein signature 178 193 - -
Stsc90792g00010 901 PRINTS Disease resistance protein signature 349 363 - -
Stsc90792g00010 901 PRINTS Disease resistance protein signature 251 265 - -
Stsc90792g00010 901 PRINTS Disease resistance protein signature 611 627 - -
Stsc90792g00010 901 Pfam NB-ARC domain 156 365 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90792g00010 Stsc-Chr90792 63662 66367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90792g00010 534 667 WRKY Transcription Factor Family AT4G12020 34.328 5.56e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90792g00010 - - aip:107625957 1150.96