Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90792g00008 ATGGCAGAGGGTAAAGGAAGAGTGTGTGTCACTGGAGGAACAGGCTTCATTGCTTCAATTATCATCAGGAATCTCCTTCAGCAAGGTTACTCTGTTAACACTACTGTTCGATCTGGTCCAGCTAATACCAAGAAAGATGTAAGCTTCCTCACAAATCTTCCCGGTGCAACCGAAAGGCTTCAAATCTTCACCGCAGATCTCAGCAACCCGGAGAGTTTTGGAGAATCGATCGTAGGCTGCGTCGGCGTGATCCACACCGCAACCCCGGTCGATTTCCAAGTACGCGAGCCACCAGAAACAGTTATCAAGAGAAGTGTTGACGGTGCAATCGGAATCGTAAAAGCATGCTTGGATTCAAAGACAGTGAAGAGAGTCGTTTACACTTCAAGTGGCTCCGCTGTCATGCACAACAGATCGGGGGCAGAGGAGATGGATGAGAGTTATTGGAGCGATGTGGATTTTCTGAATGAGACGAAGCAGTTTTCTTGGTCTTATGGGATTTCTAAGACTCTGGCTGAGAAGGCTGTGCTTGAATTTGGAGAGAAGAATGGATTGGAAGTTGTGTCTTTGATTCCTCCTTTTGTTCTTGGACCGTTCATCTGTGCCAAGCTGCCTGATTCAGTTCATACCTCTCTGTCTCTCTTATTCAATGACAGTGATCAATTTGGTGCCCTTCTTCGTTTCCCTATAGCACACGTGGATGATTTGGCAAGAGCACACATTTTTCTGCTTGAGCATCCAAATCCAAAAGGAAGATACAATTGCTCACCAAGTATTGTCACTCTTCAAGAGATAGCTGAAATTATTCGTTCAAAGCACCCTGAGTATAAAATACCTTCACCAGAGTCGATAAAGGAAATTAAGGGTGAGAATGTACCACATTTGAACTCAAAGAAATTAATTGATGCTGGATTTGAGTTCAAGTATGGAACAGAGGAAACATTTGAGGAAGCCATTCAATGCTGCAAGGAAAAGGGTTATCTTAAATAA 990 0.4384 MAEGKGRVCVTGGTGFIASIIIRNLLQQGYSVNTTVRSGPANTKKDVSFLTNLPGATERLQIFTADLSNPESFGESIVGCVGVIHTATPVDFQVREPPETVIKRSVDGAIGIVKACLDSKTVKRVVYTSSGSAVMHNRSGAEEMDESYWSDVDFLNETKQFSWSYGISKTLAEKAVLEFGEKNGLEVVSLIPPFVLGPFICAKLPDSVHTSLSLLFNDSDQFGALLRFPIAHVDDLARAHIFLLEHPNPKGRYNCSPSIVTLQEIAEIIRSKHPEYKIPSPESIKEIKGENVPHLNSKKLIDAGFEFKYGTEETFEEAIQCCKEKGYLK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90792g00008 329 CDD FR_SDR_e 8 305 - -
Stsc90792g00008 329 Pfam NAD dependent epimerase/dehydratase family 8 254 IPR001509 -
Stsc90792g00008 329 FunFam Dihydroflavonol reductase 5 329 - -
Stsc90792g00008 329 Gene3D - 5 328 - -
Stsc90792g00008 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 318 - -
Stsc90792g00008 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 323 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90792g00008 Stsc-Chr90792 54862 57998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90792g00008 4 328 Monolignol Biosynthesis Gene Families AT2G02400 35.030 2.26e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90792g00008 - K13265 gmx:102659875 454.521