Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90788g00001 ATGGTAGAGCGCCCATCGCTTTACGCTGCTCGGATCTTCCAGCTCACACTCGAGCTTGGCCACCACTCTGACGGCGAAATCATAGAATGGCTCCACCGCCACACTGAGCCATCCATAATAGCCGCAATCGGAATCGGCGTTGCTCCTGTCGCCCTGATTTCTTCCTCCGTTATCGCACCCTTGCTCTCTCACTCTGTCAAACCACCACAACGGCAGCCCACTCCTTTCTCCACCATCACTCCCACCACTTCCTGCGCCTGCTTCTCTCCTCCGGCGAGGCTGCAACCTGTGACCTCGTCGCCGATCTGCTCTCCTCTGGTGTCACGTGCTTCTCTTCGCCGCTCTTGTGCTCTCTGCTCACCCAGTCTTGCTCACTTCCTCTGTACTCTCTCTCGCCGCCGGTCATATCTCTCCGCCGTTCTAGATTTTGCTCAGAGTTCCACTGACTCACTGATTCCAACCACCGAAACCGAACTTCTGAAATTTCCATCTGTGACCTGCACAGTGGTAAGACTCTGGGGAACTTCCAGCTTTCATCACACTTGGTGA 549 0.5537 MVERPSLYAARIFQLTLELGHHSDGEIIEWLHRHTEPSIIAAIGIGVAPVALISSSVIAPLLSHSVKPPQRQPTPFSTITPTTSCACFSPPARLQPVTSSPICSPLVSRASLRRSCALCSPSLAHFLCTLSRRRSYLSAVLDFAQSSTDSLIPTTETELLKFPSVTCTVVRLWGTSSFHHTW 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90788g00001 182 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 80 IPR005333 GO:0003700
Stsc90788g00001 182 ProSiteProfiles TCP domain profile. 1 42 IPR017887 -
Stsc90788g00001 182 Pfam TCP family transcription factor 7 44 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90788g00001 Stsc-Chr90788 997 3045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90788g00001 2 57 TCP Transcription Factor Family AT5G23280 57.143 1.04e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc90788g00001 TCP 5.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90788g00001 - - aew:130752544 77.7962