Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90785g00015 ATGCCCACACCCTGTGTCTTCTCCTCTTCGATCTGCAGCCACGCCTTACGTCTTCTCCTCTTCGTCGTGCCGGTGTCTTCTCCAGTTTGTCACGCCGCTACGGCTCGCGTCTTCTCGTTTCGGCGCACCGCCTCGCTTCCCCTCTTCTCCGGTTCGTCGTGCCACCTTTGCCTCATGTCTTCTTCGATTCACGGAGAAGTAGAAGAACAACTGAATTTGTTGCTAGAATTAGCACCAACATGTATTTCTGAGAAGTTGGCCTCTAGTGAGGATTTTCTTTTCTGCATAAATAAAATGGCAGATGCCATGGCCATACACGCAACACTTGAAGAGCAAAATGAACAAGAAAGAAAGAATGTTCTTGGAACTGTAGTTAGAGGTTCAGAGAGGACATGA 396 0.4848 MPTPCVFSSSICSHALRLLLFVVPVSSPVCHAATARVFSFRRTASLPLFSGSSCHLCLMSSSIHGEVEEQLNLLLELAPTCISEKLASSEDFLFCINKMADAMAIHATLEEQNEQERKNVLGTVVRGSERT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90785g00015 131 Coils Coil 99 119 - -
Stsc90785g00015 131 Gene3D - 4 118 IPR038090 -
Stsc90785g00015 131 PANTHER DNA REPLICATION FACTOR CDT1 64 112 IPR045173 GO:0003677|GO:0030174|GO:0071163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90785g00015 Stsc-Chr90785 79688 81448 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90785g00015 64 116 Core DNA Replication Machinery Family AT2G31270 54.717 6.51e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90785g00015 - K10727 cpap:110814993 56.225