Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90785g00001 ATGGACAATTACTCGATCATATCTGGATCTTCATCTGAAATAGAATCGGGCATTCAGTTTTTAGGTGACGTCAATGAAGAGTATATTCCAAAGGCTGGAATGAGTTTTCCAACACTTGAAGAAGCTGCTTTCTACAAAGAGTATGCTAAACGTATTGGGTTTTCTACAAAGATAAGGAACACGAATAGATGCAAGGATACCAAGGAAATAAAGAATCAACTGATTACATGTAATAGAGAGGGGAAATGGATTTCTGAGATACCGTATGTTGAGCAGACAAATCCTACGTGTGGTGCAAACTGTCCTGCAAGGATTTATGTTTATGTAGTGAAGAAAACAAGACGTTGGTGTATTTCAAAGGTTGTTCTTCATCATTCACATCCATGTCGCCCAGATCAATCTTAG 405 0.3802 MDNYSIISGSSSEIESGIQFLGDVNEEYIPKAGMSFPTLEEAAFYKEYAKRIGFSTKIRNTNRCKDTKEIKNQLITCNREGKWISEIPYVEQTNPTCGANCPARIYVYVVKKTRRWCISKVVLHHSHPCRPDQS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90785g00001 134 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 129 - -
Stsc90785g00001 134 Pfam FAR1 DNA-binding domain 44 130 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90785g00001 Stsc-Chr90785 7161 8087 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc90785g00001 FAR1 1.3e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90785g00001 - - aip:110271906 144.05