Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90784g00007 ATGAGAGTCGCCGCTGACACTTTTTCGCGCCGCCGTGTTCGCCTCCACATTCCAGCAGTCGCGGACTCTTGTCCAGCTCCCAACCTCCAGCTTCCGCGCCCCTACAGCCTTCTGTCATGCCTCCAACATCCATTCGATAAGTGGCGAAACTTGAATGTTAGCAATGGCACTCAAAGGTCCAAAGAAAAATTTAAGGTTACCAGAATCAAAGCTGCTCCTGCTGGTATTGCTACCCCAATTGCTGCTTGTAATGTTGTTGTTGCTACTGGGGAGGATGCTACTCCTGCCACTAATGTGACTCATCAGCCTGATCCTTCTTCTATTGCTGTGGGTGATTCCTCCCAATATGAAGATGCCAAGAATCCTCCATGGTACAATGCAATGGTTCTTGAAGCATTGTCAGCTCTGAAAGATGCTAATGGATCTGACCTGAATGCCATTGTTAATTTTATTGAGGTGTTGCATATAAATGCTGAGAACGGAGATGTGATAGGTGAGGATGAATGA 507 0.4714 MRVAADTFSRRRVRLHIPAVADSCPAPNLQLPRPYSLLSCLQHPFDKWRNLNVSNGTQRSKEKFKVTRIKAAPAGIATPIAACNVVVATGEDATPATNVTHQPDPSSIAVGDSSQYEDAKNPPWYNAMVLEALSALKDANGSDLNAIVNFIEVLHINAENGDVIGEDE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90784g00007 168 MobiDBLite consensus disorder prediction 95 116 - -
Stsc90784g00007 168 PANTHER SINGLE MYB HISTONE 4 46 154 IPR044597 GO:0003691
Stsc90784g00007 168 Gene3D - 118 161 IPR036388 -
Stsc90784g00007 168 SUPERFAMILY "Winged helix" DNA-binding domain 120 152 IPR036390 -
Stsc90784g00007 168 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 121 168 IPR005818 GO:0000786|GO:0003677|GO:0006334
Stsc90784g00007 168 MobiDBLite consensus disorder prediction 95 114 - -
Stsc90784g00007 168 Pfam linker histone H1 and H5 family 123 152 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90784g00007 Stsc-Chr90784 75173 76365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90784g00007 46 152 Single Myb Histone (SMH) Gene Family AT1G17520 43.519 1.40e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90784g00007 K09422 - gmx:778177 98.5969