Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90782g00015 ATGTTGAACGGTTCTTACACCACAAAAAATTCCTTCTTCCTCTTCCTCTTCCTCTTCCACTTGCAGATTCTACTCTACCAAGCACACTCCTGGGTACAAGCTGGTTACTGGTTTTACGGTTCTGGCTTTCCCGTTTCTAAAATAAAAACTTCCCTCTACACTCACCTTATATGCGCTTTTGCTGAAGTCAACTCTTCAACCTATCAACTTTCCATTCCTTCAGATGCTGAAGCATCATTTCCTTCATTCACTGCCACTCTTAAGCACACCAATCCATCTCTAGTCACACTTCTTTCCATTGGTGGTGGCAATTCTAACTACACTGTCTTGTCTTCAATGGTAAGCAATGCTTCTTCAAGAAAATCATTCATTCAGTCTTCAATAAAAGTGGCTAGAAGCTATGGCTTCCAAGGCCTTGACCTTTCATGGGTTTCTGCTAACACTAGCAATGACTTGAACAATATGGGTTTGCTCTTTCAAGAGTGGAGAGCAGCTGCAAAATCTGAGGCAATAAACTCCAGCAGCAACACTAATCAAGAACTGATTTTAACTGCGGCTGTTCCATATCAACCAGGTTCTGATTTTGGTTCTTACCCTGTGGAGTCTATTAGAGATAACTTGAATTGGGTAAATGTTATGGATTATGATTACTACACGCCCCAGTCAACAAATTTTACTGGAGCTCATTCAGCCTTGTATGATCCTTCTAGTGATGTCAACACAGACACCGGAATCAAGCGATGGATAGATAGTGGGGTATCTGCTAGCAAGTTGGTTTTGTCTTTACCTTTCTATGGATATGCATGGAAGCTTAGGAACCAACGGGAGAATGGAATAGGTGCAGCAGCAACAGGTCCAGCAATCACTGAAGGAGGAGACATGACCTACAAGGAGATCAAGGATTATGTTCAAAGATATGGAGCAACTGTGCTGTATAATGCTACTTATGTGGTCAATTATTGTTCAGTTGGATCAAATTGGATAGGTTTTGATGATGCCGTTGCTGTGAAAACCAAGGTGTCTTATGCTAAAGAAAAGAAACTAGGTGGTTATGTTGTATGGCAAGTTCCCTATGATGATGACAAATGGTCACTTTCTAGTGCTGCAGCTCAACAGGTTGGTGGTGGAAAACACCATAATTGGCGGTTACTAGTGATCATTTTGATAATTGCTGTATGTATTATTCTATTGGGTTTCATAATTTACTACATAAGGAGGAGACTAGTAAAACCAAAGGGAATCATAAATGCGGCTAGAGATGCAGGACATTTTCCTGATTGTGTTCCTGATGTGCAAGCCTTTAGCTTCTGTGATATTGAGTTAGCCACTGATAGCTTTTCGATCGAAAACAAGCTTGGTCAGGGTGGCTATGGTCCTGTTTTCAAGGGCATATTACCAGATGGCAGGGAAATAGCAGTGAAGAAGTTATCAAAGGCTTCCACACAAGGATTTGAGGAATTCAAGAATGAGGTAACACTGACTGCAAGGCTACAGCATGTGAATCTTGTTCGGTTGCTGGGTTTCTACATTGACAGGGAAGAGCAGATGTTGGTTTATGAGTACATGCCAAACAAAAGCCTTGACTACTATCTCTTTGACCCTATCAGGCGGCTTCTTCTGGATTGGAGCAAGCGTGTAGCTATTATTGAGGGTGTTACTCAGGGACTGCTTTATCTGCAAGAATATTCTAGATTGACAATAATTCATAGAGATATAAAAGCTAGCAACATTCTGTTAGATAGTGAGATGAAACCAAAGATCTCGGATTTTGGTATGGCAAGAATATTCTCAAAAGATGAGCAAGAAGCAAACACTGCCAAGATTGTCGGAACATATGGTTATGTCCCTCCTGAATACCTTAAAAAAGGTTTGTATTCAGTAAAATCTGATGTGTATAGCTTTGGAGTTCTACTTCTACAAATTATAAGTGGCAAGGTAACAGCAAGGTATTATGGCGAGCACGAAAATTTGAACTTGATGGAATGTGCTTATGATTTGTGGAAAGAAGGAAGAGGCATGGAGTTTGCAGATCCTTTTCTCAATGACAAAGATTCAACGTGCAAAATATTGAGGTGCATACAAATAGGTCTATTATGTGTGCAAGAAGACGCCAATGACAGGCCTTCTGTGTTGGAAATTTCTGCAATGTTAAGAAGTGAAACTATTCTTGCTACACCAAAGAAGCCAGCGTTTTCAACAGAAAAAGATCTGCAGGTGCCAGATGAATTTGTTATGAAGCAAGAATATTATTCAGTTAACCAAGCAACAATGTCTCAGATTGTGGCTCGATAG 2292 0.404 MLNGSYTTKNSFFLFLFLFHLQILLYQAHSWVQAGYWFYGSGFPVSKIKTSLYTHLICAFAEVNSSTYQLSIPSDAEASFPSFTATLKHTNPSLVTLLSIGGGNSNYTVLSSMVSNASSRKSFIQSSIKVARSYGFQGLDLSWVSANTSNDLNNMGLLFQEWRAAAKSEAINSSSNTNQELILTAAVPYQPGSDFGSYPVESIRDNLNWVNVMDYDYYTPQSTNFTGAHSALYDPSSDVNTDTGIKRWIDSGVSASKLVLSLPFYGYAWKLRNQRENGIGAAATGPAITEGGDMTYKEIKDYVQRYGATVLYNATYVVNYCSVGSNWIGFDDAVAVKTKVSYAKEKKLGGYVVWQVPYDDDKWSLSSAAAQQVGGGKHHNWRLLVIILIIAVCIILLGFIIYYIRRRLVKPKGIINAARDAGHFPDCVPDVQAFSFCDIELATDSFSIENKLGQGGYGPVFKGILPDGREIAVKKLSKASTQGFEEFKNEVTLTARLQHVNLVRLLGFYIDREEQMLVYEYMPNKSLDYYLFDPIRRLLLDWSKRVAIIEGVTQGLLYLQEYSRLTIIHRDIKASNILLDSEMKPKISDFGMARIFSKDEQEANTAKIVGTYGYVPPEYLKKGLYSVKSDVYSFGVLLLQIISGKVTARYYGEHENLNLMECAYDLWKEGRGMEFADPFLNDKDSTCKILRCIQIGLLCVQEDANDRPSVLEISAMLRSETILATPKKPAFSTEKDLQVPDEFVMKQEYYSVNQATMSQIVAR 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90782g00015 763 FunFam Uncharacterized protein 522 726 - -
Stsc90782g00015 763 CDD GH18_plant_chitinase_class_V 30 365 - -
Stsc90782g00015 763 SMART serkin_6 446 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90782g00015 763 SMART 2g34 31 359 IPR011583 GO:0008061
Stsc90782g00015 763 FunFam Chitotriosidase-1 264 330 - -
Stsc90782g00015 763 Gene3D - 264 330 IPR029070 -
Stsc90782g00015 763 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 31 376 IPR001223 GO:0005975
Stsc90782g00015 763 Pfam Glycosyl hydrolases family 18 35 359 IPR001223 GO:0005975
Stsc90782g00015 763 FunFam Uncharacterized protein 426 521 - -
Stsc90782g00015 763 Pfam Protein kinase domain 447 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90782g00015 763 SUPERFAMILY Chitinase insertion domain 265 330 IPR029070 -
Stsc90782g00015 763 Gene3D Glycosidases 46 360 - -
Stsc90782g00015 763 SUPERFAMILY (Trans)glycosidases 34 382 IPR017853 -
Stsc90782g00015 763 Gene3D Phosphorylase Kinase; domain 1 420 521 - -
Stsc90782g00015 763 Gene3D Transferase(Phosphotransferase) domain 1 522 731 - -
Stsc90782g00015 763 SUPERFAMILY Protein kinase-like (PK-like) 429 726 IPR011009 -
Stsc90782g00015 763 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 96 735 - -
Stsc90782g00015 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Stsc90782g00015 763 ProSiteProfiles Protein kinase domain profile. 446 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90782g00015 763 CDD STKc_IRAK 452 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90782g00015 Stsc-Chr90782 38457 41463 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90782g00015 374 740 Receptor kinase-like Gene Family AT4G05200 49.459 2.99e-113 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc90782g00015 Glyco_hydro_18 6.3e-68 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90782g00015 - - gmx:100787480 1031.17