Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90782g00012 ATGGCAACATATAACTTCTCAAGAGATAATAAACTTGGAGAGGGTGGATTTGGCGCGGTTTATAAGGGAAAATTACCAAACGGCCAGGAGATAGCTGTGAAAAGGCTCTCAAAAAGCTCAAATCAAGGCCTAGAAGAGTTCAAAAATGAAATCGCGCTTACAGCAAGACTACAACATGTGAATTTAGTTAGACTTCTGGGTTACTGCACAAAAAGGGATGAGAAGATTTTGATCTATGAATACCTACCAAACAAAAGCCTAGATCATTTCCTCTTTGATCCAAGGAAATCAATTCTTTTAGACTGGAGAAAGCGTGCCATCATCATTGAAGGGGTTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTCACCATAATCCACAGAGATCTCAAAGCCAGTAATGTTTTATTAGACCAAAAGATGAATCCCAAGATATCAGATTTCGGTATGGCGAGAATTTTCAGGAAATATGACCTTGAAGCAAACACAAGCAGAATTGTCGGCACATAG 516 0.3895 MATYNFSRDNKLGEGGFGAVYKGKLPNGQEIAVKRLSKSSNQGLEEFKNEIALTARLQHVNLVRLLGYCTKRDEKILIYEYLPNKSLDHFLFDPRKSILLDWRKRAIIIEGVTQGLLYLQEYSNFTIIHRDLKASNVLLDQKMNPKISDFGMARIFRKYDLEANTSRIVGT 171
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc90782g00012 171 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Stsc90782g00012 171 Gene3D Transferase(Phosphotransferase) domain 1 82 171 - -
Stsc90782g00012 171 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Stsc90782g00012 171 ProSiteProfiles Protein kinase domain profile. 6 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90782g00012 171 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 171 - -
Stsc90782g00012 171 SUPERFAMILY Protein kinase-like (PK-like) 2 171 IPR011009 -
Stsc90782g00012 171 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 82 171 - -
Stsc90782g00012 171 ProSitePatterns Protein kinases ATP-binding region signature. 12 34 IPR017441 GO:0005524
Stsc90782g00012 171 FunFam Uncharacterized protein 1 81 - -
Stsc90782g00012 171 Pfam Protein kinase domain 7 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90782g00012 171 SMART serkin_6 6 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc90782g00012 Stsc-Chr90782 33087 33903 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90782g00012 2 171 Receptor kinase-like Gene Family AT4G23290 67.059 6.85e-77 240
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc90782g00012 Pkinase 2.4e-33 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90782g00012 - - aip:107617480 315.079