Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90782g00011 ATGTCTCTATTGACTTCATATTTGTTTTGCAGCGGTTACGTACCTCCTGAGTATGTGAGAAAAGGAATATACTCGACCAAGTACGATGTTTATAGCTTTGGAGTTCTTCTGTTGCAAATCATAAGTGGGAAGAGGACTTCATGTTACTACAGACCACATGAAAATATGAACCTGTTGGAATATGCATATGAGCTGTGGATGGAGGGAAGAGGTGTGGAATTTCTAGACCCTTCATTAGATGATACAACATCAGCATGTAAACTCATGAGATGCATGCAAGTAGCTCTTCTGTGTGTTCAAGAGAATTCTGCAGATAGACCTTCCATGTTGGAAGTTGATTCAATCCTCAAGAATGAAACTGCAGCTATTGGTATTCCCAACATGCCTGGTTTCTCAGTGAAGAATCACGGAGATGGTGAGGAAGAAAGACACATAAAATATGTTTCGATAAATGATGTTATTAAAGGCAATGGCACACTAGAAAGAGCGACGATGAATGCCTCTGAAGGTGAGATTTTCGGTGCCGATTGGGAATCAACTGTTGAGGGTTAA 552 0.404 MSLLTSYLFCSGYVPPEYVRKGIYSTKYDVYSFGVLLLQIISGKRTSCYYRPHENMNLLEYAYELWMEGRGVEFLDPSLDDTTSACKLMRCMQVALLCVQENSADRPSMLEVDSILKNETAAIGIPNMPGFSVKNHGDGEEERHIKYVSINDVIKGNGTLERATMNASEGEIFGADWESTVEG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90782g00011 183 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
Stsc90782g00011 183 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 149 - -
Stsc90782g00011 183 Pfam Protein tyrosine and serine/threonine kinase 12 113 IPR001245 GO:0004672|GO:0006468
Stsc90782g00011 183 SUPERFAMILY Protein kinase-like (PK-like) 4 122 IPR011009 -
Stsc90782g00011 183 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90782g00011 Stsc-Chr90782 32072 33042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90782g00011 12 144 Receptor kinase-like Gene Family AT4G11460 38.806 8.45e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc90782g00011 PK_Tyr_Ser-Thr 4.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90782g00011 - - aprc:113847882 240.35