Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90782g00010 ATGGCTTCAACATCAAACCTTACTTGGATCTTCTTACTCATCTTCTTCCTTCCTCTCACATCTCACACTTTCGCATCGTCTTGGGTGAAAGCTGGTTATTACTATTCCGCCACTGAAATCTCTGCCTCTGACATCAAATCCAAACTCTTCACTCACCTCATATGCGCTTTTTCTTTCATTAACTCAACCAACTATAACATCTTCATCAATGCTTCTCAACTACGCACCTTCTCAGCCTTCACGCAAACAGTTAAGTTGCAAAACCCAACCGTTTCCACGCTTCTATCCATCTGGGCTGGCGGCAAAGACAACTTTACCCTTTTCTCCTCAATGCTTAACCAATCTTCTCATAGAAAATCCTTCATTCATTCTTCTATCACAACAGCAAGGTCACATGGTTTTCAAGGCATAGATCTTTATGGAGCATCCCCAAGACAAGCTTCGGATCTTGCCAATTTCGGCAGCCTTTTAGAGGAATGGCGAGCTGCAATAACTTCTGAGGCAAGGAACTCTAGCAAACCAGAGTTATTGTTAGTCATGGCGGGTTACTACCTTAGAGCTTCTGATTCAAGGAGTTACCCTTTTGATTCAATGCAGAGGAACTTGGACTGGGTGCATTTTGTTGCATATGATTACTATGTTCCTACAAAGAACAATATCACAGGCTTTCATGCAGCTTTATATGGTCCAACTAATTGGGACAACACTGATTCTGGTATCAAAGAATGGAGGAGAAGGGGATTCTCCTCTAACAAGCTTCTGATTGGGTTGCCTTATCATGGATATGCATGGACGCTTGTGAATCCAGGGGACAGTGGCATTGCGGCACCCACTTCGGGACCTGCCATTACAATGGATGGTTCCATGGGCTATAAGTTGATAAAGAGTTTTGTTAGAAGCTTTGGAAATAATGGTGTTGTTTCAAGATTTAATGATACTTTTGTGGTGGATCAGTTCACAGTTGCATCCACCACTTGGGTTGATTTTGATGATGTGGATTCCATCAGAGCCAAAGTTTCTTATGCCAAGGAAAAGGGACTTCTTGGCTACAATGTGTTCCAAGTTGCCAATGATGAAAACTGGGTCCTTTCAAAGGCAGCTCAAGAAGTAGATGAAGATCATCATATGAGGAGGTTGTTGATACTTGTTCTGCTCTCAGCAGTAGCTGTCATAACTCTTTTGGGAATAGTGTTTTGCTACTGCCATAGAGGAACCTCAGCCACTATTAAAAAAGCATTATACCAAATAAGGGAATGTTTATCAGGAGCTGAACAAGATCAAGTAGAAGGAAGAAATGGTTCTGATTTGACTGCATTCAGTTATCTCACAATTAAGATGGCAACAAATAACTTCTCAAGTGATAATAAACTTGGAGAGGGTGGATATGGCAGAGTTTATAAGGGAAAATTAAGAAAGGGGCAGGAGATAGCTGTGAAAAGACTCTCAGAAAGCTCGAATCAAGGCCTAGAAGAGTTCAAAAATGAAATCGCGCTTACAGCAAGACTACAACATGTGAATTTAGTTAGGCTTCTGGGTTACTGCACAAAAAGGGATGAGAAGATTTTGATCTATGAATACCTACCAAACAAAAGCTTAGATCATTTCCTCTTTGATCAAAGGAAATCAATTCTTTTAGACTGGAGCAATCGCGCCAACATCATTGAAGGGGTTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTCACCATAATCCACAGAGATCTCAAAGCCAGTAATGTTTTATTAGACCAAAAGATGAATCCCAAGATATCAGATTTCGGTATGGCGAGAATTTTCAGGAAATATGATCTTGAAGCAAACACAAACAGGATTGTTGGGACATACGGTTATGTACCTCCTGAGTATGTGAGAAAAGGCATATACTCGACCAAGTACGATGTTTATAGCTTTGGAGTTCTTCTGTTGCAAATCATAAGTGGGAAGAGGACTTCATGTTACTACGGACCACATGAAAATCTGAACCTGTTGGAATATGCATATGAGCTGTGGATGGAGGGAAGAGGTGTGGAATTTCTAGACCCTTCATTAGATGATGCAACATCAGCATGTAAACTCATGAGATGCATGCAAGTAGCTCTTCTGTGTGTTCAAGAGAATTCTGCAGATAGACCTTCCATGTTGGAAGTGTATTCAATTCTCAAGAATGAAACTGAAGCTATTGGTATTCCTAAAATTCCTGGTTTCTCAGTGAAGAATCATGGAAATGATGAGGAAGAAAGACACATAAAATATGTTTCAATCAATGATGTTACAATTTCTGAAATGACACCAAGATGA 2304 0.4032 MASTSNLTWIFLLIFFLPLTSHTFASSWVKAGYYYSATEISASDIKSKLFTHLICAFSFINSTNYNIFINASQLRTFSAFTQTVKLQNPTVSTLLSIWAGGKDNFTLFSSMLNQSSHRKSFIHSSITTARSHGFQGIDLYGASPRQASDLANFGSLLEEWRAAITSEARNSSKPELLLVMAGYYLRASDSRSYPFDSMQRNLDWVHFVAYDYYVPTKNNITGFHAALYGPTNWDNTDSGIKEWRRRGFSSNKLLIGLPYHGYAWTLVNPGDSGIAAPTSGPAITMDGSMGYKLIKSFVRSFGNNGVVSRFNDTFVVDQFTVASTTWVDFDDVDSIRAKVSYAKEKGLLGYNVFQVANDENWVLSKAAQEVDEDHHMRRLLILVLLSAVAVITLLGIVFCYCHRGTSATIKKALYQIRECLSGAEQDQVEGRNGSDLTAFSYLTIKMATNNFSSDNKLGEGGYGRVYKGKLRKGQEIAVKRLSESSNQGLEEFKNEIALTARLQHVNLVRLLGYCTKRDEKILIYEYLPNKSLDHFLFDQRKSILLDWSNRANIIEGVTQGLLYLQEYSNFTIIHRDLKASNVLLDQKMNPKISDFGMARIFRKYDLEANTNRIVGTYGYVPPEYVRKGIYSTKYDVYSFGVLLLQIISGKRTSCYYGPHENLNLLEYAYELWMEGRGVEFLDPSLDDATSACKLMRCMQVALLCVQENSADRPSMLEVYSILKNETEAIGIPKIPGFSVKNHGNDEEERHIKYVSINDVTISEMTPR 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90782g00010 767 Pfam Protein kinase domain 452 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90782g00010 767 ProSiteProfiles Protein kinase domain profile. 451 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90782g00010 767 Gene3D Transferase(Phosphotransferase) domain 1 527 730 - -
Stsc90782g00010 767 Gene3D Glycosidases 43 359 - -
Stsc90782g00010 767 SUPERFAMILY (Trans)glycosidases 28 369 IPR017853 -
Stsc90782g00010 767 CDD GH18_plant_chitinase_class_V 26 364 - -
Stsc90782g00010 767 SMART serkin_6 451 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90782g00010 767 ProSitePatterns Protein kinases ATP-binding region signature. 457 479 IPR017441 GO:0005524
Stsc90782g00010 767 SMART 2g34 28 358 IPR011583 GO:0008061
Stsc90782g00010 767 FunFam Uncharacterized protein 427 526 - -
Stsc90782g00010 767 Gene3D Phosphorylase Kinase; domain 1 415 526 - -
Stsc90782g00010 767 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 184 765 - -
Stsc90782g00010 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Stsc90782g00010 767 Gene3D - 259 329 IPR029070 -
Stsc90782g00010 767 CDD STKc_IRAK 457 724 - -
Stsc90782g00010 767 FunFam Uncharacterized protein 527 731 - -
Stsc90782g00010 767 Pfam Glycosyl hydrolases family 18 33 358 IPR001223 GO:0005975
Stsc90782g00010 767 SUPERFAMILY Protein kinase-like (PK-like) 436 732 IPR011009 -
Stsc90782g00010 767 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 374 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90782g00010 Stsc-Chr90782 28137 31078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90782g00010 439 767 Receptor kinase-like Gene Family AT4G11530 51.622 1.21e-115 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc90782g00010 Glyco_hydro_18 1.1e-54 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90782g00010 - - aprc:113847882 1151.73