Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90780g00009 ATGAATTCATTGCATGAGGAACCACAATTGGAAGAACAAAATGAGTTTTTGTGTAATGTTGATGAGGAGTATGTTCCCAAGGTTGGGATGACATTTAAGACATGTACGGAAGCTAATGAATTCTACAAGGAGTATACTAAACGAGCTGGATTTGCTTCTCGAATTAGAAATTCACAGAGGAATAAAGAGACTGGTGCTATCAAGAATCAACTCTTCACATGTAACAGAGAGGGGAAAAGGACATCCGACATTCCCGAGGCGGAGAAGACGAACCCGATGTCTCCGGAAGAAGAAGCAGTAAGGGAGAGTTCAACCTCTACCTTCTGCAAGCGAGGGCACGACGCAGAGAACAGTGACGATGCGACGACCACCGAGATGGAGATGGAGATGCGGCGGCGACGACAAGACGGAGCTTCGGGCGACGGTTCGACGGCGACAGAGGGTTTGTGGAGTTCTTCTCGTTGA 465 0.4774 MNSLHEEPQLEEQNEFLCNVDEEYVPKVGMTFKTCTEANEFYKEYTKRAGFASRIRNSQRNKETGAIKNQLFTCNREGKRTSDIPEAEKTNPMSPEEEAVRESSTSTFCKRGHDAENSDDATTTEMEMEMRRRRQDGASGDGSTATEGLWSSSR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90780g00009 154 Pfam FAR1 DNA-binding domain 40 96 IPR004330 -
Stsc90780g00009 154 MobiDBLite consensus disorder prediction 61 77 - -
Stsc90780g00009 154 MobiDBLite consensus disorder prediction 103 138 - -
Stsc90780g00009 154 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 90 - -
Stsc90780g00009 154 MobiDBLite consensus disorder prediction 61 154 - -
Stsc90780g00009 154 MobiDBLite consensus disorder prediction 79 96 - -
Stsc90780g00009 154 MobiDBLite consensus disorder prediction 139 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90780g00009 Stsc-Chr90780 50949 53742 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc90780g00009 FAR1 3.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90780g00009 - K17604 aip:110271906 85.8853