Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90777g00007 ATGATGATGATGATGCAGGGTGGAAGATTGATGGAAGAAATGGCAGTGATTGGAGGGTTGATTGGTGTGCAGTTTATGACTGCAGGGAATGCAGTTTTGATGAGTTTTGTTATGTCTTTGGGACTCAAATCTCTCACCATTGTTACATTCATGTCCTTTTCTACATTCCTTTTGCTCTCCCCTCTTGCCTTCTACTCTGAAAGGAGCCTGTGGCCTAAGAAACTCAGTTTCAAGTTGGTTTTCAAGTTGATCTTGCTTTCCTTTGGAGGGATAACATTCCAGGCTTTTATGCTTAAAGGAATGAAGCTAACATCACCAGCAATGGGCACTGCCATGCCAAACATTGCCCCTGGACTTATCTTCCTCATTGCTTGGATATTTCGGTTGGAAAAGGTAAACATAAAATCGAGATACAGTAGAGTCAAAATCATTGGGACAATGCTTTGTGTGGTAGGGGCTTTTGCAATGAGCATACTGCAAAGCATGTCCACCAACACTACTACTGCCAACGAAGAAGCAACAACACTTCAATTTTTACCAAATCCAACAGATAATGTTGTCTTTGACAAAAACAAGATATTGGGTTGCATCTATCTTTTGCTTGCTGTCTCTTCATTATCAGCTGCCCTAGTCTTCCAGGCGTTTATATATAGAGATTTTCCGGCACCGATATCTTTGTGCGTGACCACATCGTTTATAGGGACGTTCATGACAGCAGCATTTCAATACCTTGAAGAACACGAAATCCAATTTGGCTTGGATGTTCTTAGTGCTCGAGACATCATCTTCTATTATCTTCTGGAAGGTGCAATAAACGGAGTGTGCATAAGCTTCAGTAATTGGGCAATAAAGAAGAAAGGGCCAGTTTTGGTGTCCATGTTCAGCCCTATTGGCACCGTTTGCTCTGCCATTTTCTCTGTTCTTACCATAGGAGTCTCCATTAATGTTGGAAGCTATGGGGGCATGTTCGTAATGTTTACTGGGCTTTACTTTTTCCTTTGGGCAAAAGGGAAAGAAGAAGAAACTGAAAGTGAAGGAAGTGGCAAACAAGGTGAATATGATGTGGAGAAGCCTCTCTTAGCTTAG 1086 0.418 MMMMMQGGRLMEEMAVIGGLIGVQFMTAGNAVLMSFVMSLGLKSLTIVTFMSFSTFLLLSPLAFYSERSLWPKKLSFKLVFKLILLSFGGITFQAFMLKGMKLTSPAMGTAMPNIAPGLIFLIAWIFRLEKVNIKSRYSRVKIIGTMLCVVGAFAMSILQSMSTNTTTANEEATTLQFLPNPTDNVVFDKNKILGCIYLLLAVSSLSAALVFQAFIYRDFPAPISLCVTTSFIGTFMTAAFQYLEEHEIQFGLDVLSARDIIFYYLLEGAINGVCISFSNWAIKKKGPVLVSMFSPIGTVCSAIFSVLTIGVSINVGSYGGMFVMFTGLYFFLWAKGKEEETESEGSGKQGEYDVEKPLLA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90777g00007 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 338 - -
Stsc90777g00007 361 MobiDBLite consensus disorder prediction 341 361 - -
Stsc90777g00007 361 Pfam EamA-like transporter family 21 157 IPR000620 GO:0016020
Stsc90777g00007 361 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020
Stsc90777g00007 361 PANTHER WAT1-RELATED PROTEIN 18 343 IPR030184 GO:0016020|GO:0022857
Stsc90777g00007 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90777g00007 Stsc-Chr90777 49389 53545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90777g00007 9 350 Nodulin-like Gene Family AT5G47470 50.581 8.00e-114 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90777g00007 - - gmx:100809182 439.884