Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90775g00006 ATGGCTGATTCATCAGGATCCTCTTCTAAGAGAATGTGGTGCTCAGTGCCTGAAAAGTTTCAGCTGCATGGAGCAATGTTGGCACTTCAATTTGGATATGCTGGCTTCCATGTTGTTTCAAGGGCTGCCCTTAACATGGGAGTTAGCAAGCTTGTTTTTCCAGTTTATAGGAACATCATTGCTTTGCTTCTTCTCCTTCCCTTTGCATACTTCTTGGAAAAGAAGGAGAGGCCAGCCATGACACTGAACTTCCTCGGCCAGTTCTTTGTTCTGGCACTTGTCGGGATTACAGCAAATCAAGGTTTCTATTTGCTTGGGTTGGAGAACACATCACCTACCTTCGCTTCAGCAATACAGAACTCAGTTCCAGCCATTACATTTCTCATGGCTGCCATTCTTAGGATTGAACAAGTGAGATTAAACAGAAAAGATGGAATATCAAAAGTAGTTGGGACAATCCTATGTGTAATTGGTGCAACAGTGATAACTCTCTACAAGGGTCCAACAATATACTCTCCAAAACCATCAACAACATTATTATTAACACCAACACAAACATCAACATTATTATTGGAAGGAGATGCTACCAGTGAAGGCAAAAACTGGACCCTTGGGTGCATTTACCTAATTGGACATTGTTTATCATGGTCTGGTTGGCTTGTGTTGCAAGCACCTGTTCTCAAGAAATACCCTGCAAGGCTCTCTGTTACTTCATACACTTGCTTCTTTGGATTATTGCAATTCATTCTCATTGCTTTGCTTTTTGAAAGAGATTATCAAGCTTGGGTTTTCCACTCTGGTGCTGAAGCCTTCACAATCTTATATGCGGGAGTGGTGGCATCAGGAATTGCATTTGCAGTACAAATATGGTGCATTGATAGAGGGGGTCCTGTCTTCGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTGGCAATCATGGCTTCCATTGCTCTTGGAGAAGAGTTCTACTTGGGAGGGGTAATTGGGGCAGTGCTAATTGTGGTTGGACTCTACCTAGTTTTGTGGGGTAAAAGTGAAGAGAAGAGAATTGCACAACTTGCAATTGCATCATCAGATCACAGCATTATTAGGCCTTCAAGTCATGCCAAAGCATCATCACTCACTCAGCCACTAATCCTCCCTTCATCAACTGAGAATAATGTTTAA 1170 0.4222 MADSSGSSSKRMWCSVPEKFQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAMTLNFLGQFFVLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDGISKVVGTILCVIGATVITLYKGPTIYSPKPSTTLLLTPTQTSTLLLEGDATSEGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFILIALLFERDYQAWVFHSGAEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASIALGEEFYLGGVIGAVLIVVGLYLVLWGKSEEKRIAQLAIASSDHSIIRPSSHAKASSLTQPLILPSSTENNV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90775g00006 389 Pfam EamA-like transporter family 204 342 IPR000620 GO:0016020
Stsc90775g00006 389 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020
Stsc90775g00006 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 347 - -
Stsc90775g00006 389 PANTHER WAT1-RELATED PROTEIN 24 358 IPR030184 GO:0016020|GO:0022857
Stsc90775g00006 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90775g00006 Stsc-Chr90775 31413 36015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90775g00006 1 387 Nodulin-like Gene Family AT1G75500 74.555 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90775g00006 - - gmx:100792395 610.912