Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90775g00004 ATGAGAGGAATTGAGGAGAGAAAGAGAAAGCAAGTGAGGAAGCAAGCACAAGGCAATTCAAGAAAGGGTTGTATGAGGGGAAAAGGAGGCCCTGAAAATGCAACATGCACCTACAAAGGTGTAAGGCAAAGGACTTGGGGAAAATGGGTAGCCGAGATACGTGAGCCACATCGTGGGTCACGTATCTGGCTTGGAACATTTCAAACGTCCCATGAAGCTGCCTTAGCATACGATAATGCTGCTCTTAAGCTTTACGGCCAAGATGCTAAACTCAACCTCCCTCACCTTCGTCCCTCTGAACCTATCGCTCAGCAGCAGCAACAACAACAACAACAAACTCAGATGATGGTTAATCAACACAACATTGGTACCTCTTTCAATAACAACAACATTGATATCACCAACAACAACAACAATGACCTCAAACTCTTGGTGCCCATGGCTGAGGTTGGTGTTACACCAATTTACACAAGTAGTGAAGCTACTATGCCTATTCCCTCATATGAAATCAACATCAACAACATTAATTCCAATATCAACAACAACAATTTCTACACCAAACCTATTATATTGGAAAGCTTCCAAAACCCAACAAAGCCTCCTATGATGAACAACAACAATAATAATACTGTGAGGAAGCCAAGTAGTTCCTCATCATTCTGTGAGGTAATGAATGAAGATGTGCCAAGTTTTTATGATGATTCCATTTGGACAGAAGCTGCTGCATCTTTGAATTTTCCTATGTTTTCATCAGATTCTAGTAACAATAATGGGTTTTATGAAGCCGGGGACATGGCTTGGGCTATGCAAAGTTCATGGTGA 822 0.4161 MRGIEERKRKQVRKQAQGNSRKGCMRGKGGPENATCTYKGVRQRTWGKWVAEIREPHRGSRIWLGTFQTSHEAALAYDNAALKLYGQDAKLNLPHLRPSEPIAQQQQQQQQQTQMMVNQHNIGTSFNNNNIDITNNNNNDLKLLVPMAEVGVTPIYTSSEATMPIPSYEININNINSNINNNNFYTKPIILESFQNPTKPPMMNNNNNNTVRKPSSSSSFCEVMNEDVPSFYDDSIWTEAAASLNFPMFSSDSSNNNGFYEAGDMAWAMQSSW 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90775g00004 273 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 10 250 - -
Stsc90775g00004 273 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
Stsc90775g00004 273 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Stsc90775g00004 273 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Stsc90775g00004 273 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Stsc90775g00004 273 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Stsc90775g00004 273 FunFam Ethylene-responsive transcription factor 2 36 95 - -
Stsc90775g00004 273 CDD AP2 36 96 IPR001471 GO:0003700|GO:0006355
Stsc90775g00004 273 SUPERFAMILY DNA-binding domain 37 95 IPR016177 GO:0003677
Stsc90775g00004 273 MobiDBLite consensus disorder prediction 1 30 - -
Stsc90775g00004 273 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90775g00004 Stsc-Chr90775 16351 18186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90775g00004 13 101 AP2-EREBP Transcription Factor Family AT1G75490 74.157 3.97e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc90775g00004 AP2 5.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90775g00004 - - adu:107493032 325.479