Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90774g00005 ATGGATTCAATTCTAACTTATCTAAACACTACCACAATAATCTTTTCTCTCATCATCATTACCATCTTGTCCTATTTATCATTATATCGTCCATTCAAAGTTGGCAACAATAAACCTAGAGAACCTCCTCTGGTGGCTGGTGCTTGGCCAGTACTGGGTCACCTTCCTCTCTTCCATGGCTCACGCTCACAGCCACTACTCCACATAACATTAGCCGCCATGGCCGATAAATACGGACCCCTTTTCACGGTGAAGCTTGGTTCCAAAAAGATCGTAGTACTAAGCGATTCAGAACTGGCCAAAGAATGCTTCACCAGAAAGGATGCAGTTGCTTCTTCTCGTCCCAATCTTGTCTCATTTGAAAGACTTGGCTACAACCGAGCCATGATTGGTTTCACGCCGTACAGTCCGTACTGGCGTGAACTCCGCAAGTTTTCAAACTTAGAACTTCTCTCGAATCGGCGCATAGAGCTGCTAAGCCATGTTCGTATCTCCGAAGTTCGAGCTTCAACAAAAGAGCTCCTGAATCTTTGGTCCACTGAGAAGGATGAATCTGGGTATGTGTTGGTGGACATAAAGCAATGGTTTGCGGAATTGACATTCAACATGGTTCTTAGAATGGTTGCGGGGAAGAGATTCTTTGGAGCCATGGATTCGGAGAGTGAGGAGAAAGCAAATAAATTTTTGAAGACTATGAGGGAGATGATGCGGCTTATGGGGCTGTTTACTGTGGGAGATGCAATTCCTTCTTTAAGGTGGTTGGATTTGGGGGGTCATGAGAAGGCTATGAAAAAAACTGCTAAAGAACTTGATGAGATTTTAAGTGGTTGGTTAGATGAACATCGCCAAAAGATGGGTTTATTAGATGAAAAGGATTCAGGTGAGGAACGTGAATGTGACTTCATTGATGTCATGCTTTCGATGTTTTCTGATACCAAGATTGATGCGTTTGATGCTGATACCATTTACAAAGCTACAATATTGACAATGATAATTGGGGGAAATGATACAACCACAGTTACGTTTACATGGGCCATGTGTTTGCTACTGAGAAATCCTCATGTACTGGAAAAGGCAAAACAAGAACTTGATGAGAAAATTGGGAAAGACAGATGCATAAATGAATCGGATATAAATAAATTACCATACCTTCAAGCTATAATCAGAGAAACATTACGATTATATCCGGCAGCACCTCTAGCAGCACCTCATGAATTCACAGAAAATTGCACTTTAGGTGGATATCATATCGAAAAGGGAACTTGGCTGATTACAAATATCTGGAAAATCAATACTGACCCTTCTGTTTGGTCAGATCACTTAGAATTTAGGCCAGAGAAATTTCTAACAACACACAAAGATATCGATGTTAGAGGCCATCATTTTGAATTGTTACCATTTGGAGGTGGTAGGCGTATTTGTCCCGGAATTTCCTTTGGCCTTCAAATGCTTCACTTTGTTTTGGCCAGCTTTTTGCATTCCTTTCAAATACAGAATGCTGCTCCAACTGTTGATATGAGTGCGACTCTTGGATTGGTCATTGCTAAAACTACTCCACTTAAGATTATGGTTAAACCACGTTTATCTCCCGGTTGCTATGTAACCATATAA 1611 0.4115 MDSILTYLNTTTIIFSLIIITILSYLSLYRPFKVGNNKPREPPLVAGAWPVLGHLPLFHGSRSQPLLHITLAAMADKYGPLFTVKLGSKKIVVLSDSELAKECFTRKDAVASSRPNLVSFERLGYNRAMIGFTPYSPYWRELRKFSNLELLSNRRIELLSHVRISEVRASTKELLNLWSTEKDESGYVLVDIKQWFAELTFNMVLRMVAGKRFFGAMDSESEEKANKFLKTMREMMRLMGLFTVGDAIPSLRWLDLGGHEKAMKKTAKELDEILSGWLDEHRQKMGLLDEKDSGEERECDFIDVMLSMFSDTKIDAFDADTIYKATILTMIIGGNDTTTVTFTWAMCLLLRNPHVLEKAKQELDEKIGKDRCINESDINKLPYLQAIIRETLRLYPAAPLAAPHEFTENCTLGGYHIEKGTWLITNIWKINTDPSVWSDHLEFRPEKFLTTHKDIDVRGHHFELLPFGGGRRICPGISFGLQMLHFVLASFLHSFQIQNAAPTVDMSATLGLVIAKTTPLKIMVKPRLSPGCYVTI 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90774g00005 536 PANTHER CYTOCHROME P450 82C3-RELATED 20 533 - -
Stsc90774g00005 536 SUPERFAMILY Cytochrome P450 48 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 CDD CYP82 79 527 - -
Stsc90774g00005 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Stsc90774g00005 536 Pfam Cytochrome P450 47 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 Gene3D Cytochrome P450 33 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 FunFam Cytochrome P450 82C4 33 525 - -
Stsc90774g00005 536 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00005 536 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90774g00005 Stsc-Chr90774 29458 32997 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90774g00005 12 534 Cytochrome P450 AT4G31940 46.617 3.88e-169 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90774g00005 - - adu:107490967 811.601