Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90774g00004 ATGGTGGCCGGTGCATGGCCCATAGTTGGTCACCTTCCGCTCTTGCATGCTTCAAAGCCACTACATCTAACTTTAGGGGCCATGGCTGACAAATACGGACCCCTTTTCACCATTAAAATCGGCTCCAAAAAAGTTTTGGTGCTAAGCAACTCAGAGATGGCGAAAGAATGCTTCACTAAAAACGACATCGTTTCTTCCTCTCGTCCGAACCTTGTTTCATCTCAGCATCTTGGCTACAAACGAGCTTTGTTCGCTTTGGCACCTTATGGTTCATACTGGCGTGAGCTGCGCAAGATTGCTACGCTAGAACTTCTCTCCAATCGACGCATAGAGCTACAAAGCCATGTTCGTGTCTCCGAAGTTGAAGCTTCAACAAAAGAACTCCTTAATCTTTGGTCCACTCAGAAGAATGAAGCTGGATACGTGTTGTTGGACTTAAAGCAATGGATCTCAGAATTGATATTCAACATGGTTTCAAGAATGATTATTGGAAAGAGGTTCTTTGGAGCCATGGATTCCGAGAATGAGAAAAAGGCGATTGAGTATCTAAAAAGTATAAGGGAATTTTTGCGTCTTTTAGGGATTTTCACCTTGGGAGATGCTATTCCTTCCCTAAGGTGGTTGGATTTGGGGGGTCATGAGAAGGCCATGAAGAAAACTGCTATGGAATTGGACAAGTTTTTGACTGAATGGTTGAATGAACATCACCAGAAAAAGACAACCAATGAAGAACGAGACTTCATTGATGTTATGATTTCGGTGCTCTCTGATGCAAAAATTCACCAGTTTGATGCTGACACCATAACCAAAGCCACAACGTTGTCAATGATTGCGGGAGCAACCGATACAACCACAGTTACTCTTACTTGGGCAATGTGTCTACTATTAAACAATCCTAGTAAATTCGATAAAGCAAAAGAAGAACTTGACAAGGAAATTGGAAGAGATCAATGCGTACAAGAGTCAGATATAAATAAATTAAGATATCTCCAAGCTATAGTCAAAGAGACACTAAGACTGTATCCACCCGCTCCTTTGGCTGGACCTCATGAAATCACAGAGAATTGTAATTTAGGTGGATACCAAATCGAAAAAGGAATTTGGCTCATGATGAATATCTGGAAAATCAACAGTGACCCTTGTTTTTGGCCAAATCAGTTGGAGTTTGACCCAGATAAATTTCTCACAACTCACAAAGAGGTTGATATGAAGGGTCAACATTATGATTTGTTACCATTTGGATGTGGTAGAAGAATTTGTCCTGGAATTTCATTTGGCCTCGGAGTAGTTCACTTTGTTTTGGCTCATTTGTTGCACTCCTTTGAAATAATAAATCCATCTGATGAACCAATTGACATGAGTGGAACCCTTGGAATTGTCCATGCTAAAACTACTCCATTAATGGTTATGGTCAAACCACGTTTATTTTCTAATTGTTACGAAACCATAATGTAA 1455 0.4048 MVAGAWPIVGHLPLLHASKPLHLTLGAMADKYGPLFTIKIGSKKVLVLSNSEMAKECFTKNDIVSSSRPNLVSSQHLGYKRALFALAPYGSYWRELRKIATLELLSNRRIELQSHVRVSEVEASTKELLNLWSTQKNEAGYVLLDLKQWISELIFNMVSRMIIGKRFFGAMDSENEKKAIEYLKSIREFLRLLGIFTLGDAIPSLRWLDLGGHEKAMKKTAMELDKFLTEWLNEHHQKKTTNEERDFIDVMISVLSDAKIHQFDADTITKATTLSMIAGATDTTTVTLTWAMCLLLNNPSKFDKAKEELDKEIGRDQCVQESDINKLRYLQAIVKETLRLYPPAPLAGPHEITENCNLGGYQIEKGIWLMMNIWKINSDPCFWPNQLEFDPDKFLTTHKEVDMKGQHYDLLPFGCGRRICPGISFGLGVVHFVLAHLLHSFEIINPSDEPIDMSGTLGIVHAKTTPLMVMVKPRLFSNCYETIM 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90774g00004 484 SUPERFAMILY Cytochrome P450 5 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PANTHER CYTOCHROME P450 82C3-RELATED 3 480 - -
Stsc90774g00004 484 Pfam Cytochrome P450 5 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS E-class P450 group I signature 153 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS E-class P450 group I signature 53 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 FunFam Cytochrome P450 82C4 1 472 - -
Stsc90774g00004 484 Gene3D Cytochrome P450 2 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00004 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90774g00004 Stsc-Chr90774 13984 16345 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90774g00004 3 475 Cytochrome P450 AT4G31940 46.901 2.23e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90774g00004 - - adu:107490967 639.802