Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90774g00003 ATGGATTCAATTCTAACTTATCTAAACACTACCACAATAATCTTTTCTCTCATCATCATTACCATCTTGTCCTATTTATCATTATATCGTCCATTCAAAGTTGGCAACAATAAACCTAGAGAACCTCCTCTGGTGGCTGGTGCTTGGCCAGTACTGGGTCACCTTCCTCTCTTCCATGGCTCACGCTCACAGCCACTACTCCACATAACATTAGCCGCCATGGCCGATAAATACGGACCCCTTTTCACGGTGAAGCTTGGTTCCAAAAAGATCGTAGTACTAAGCGATTCAGAACTGGCCAAAGAATGCTTCACCAGAAAGGATGCAGTTGCTTCTTCTCGTCCCAATCTTGTCTCATTTGAAAGACTTGGCTACAACCGAGCCATGATTGGTTTCACGCCGTACAGTCCGTACTGGCGTGAACTCCGCAAGTTTTCAAACTTAGAACTTCTCTCGAATCGGCGCATAGAGCTGCTAAGCCATGTTCGTATCTCCGAAGTTCGAGCTTCAACAAAAGAGCTCCTGAATCTTTGGTCCACTGAGAAGGATGAATCTGGGTATGTGTTGGTGGACATAAAGCAATGGTTTGCGGAATTGACATTCAACATGGTTCTTAGAATGGTTGCGGGGAAGAGATTCTTTGGAGCCATGGATTCGGAGAGTGAGGAGAAAGCAAATAAATTTTTGAAGACTATGAGGGAGATGATGCGGCTTATGGGGCTGTTTACTGTGGGAGATGCAATTCCTTCTTTAAGGTGGTTGGATTTGGGGGGTCATGAGAAGGCCATGAAGAAAACTGCTATGGAATTGGACAAGTTTTTGACTGAATGGTTGAATGAACATCACCAGAAAAAGACAACCAATGAAGAACGAGACTTCATTGATGTTATGATTTCGGTGCTCTCTGATGCAAAAATTCACCAGTTTGATGCTGACACCATAACCAAAGCCACAACGTTGTCAATGATTGCGGGAGCAACCGATACAACCACAGTTACTCTTACTTGGGCAATGTGTCTACTATTAAACAATCCTAGTAAATTCGATAAAGCAAAAGAAGAACTTGACAAGGAAATTGGAAGAGATCAATGCGTACAAGAGTCAGATATAAATAAATTAAGATATCTCCAAGCTATAGTCAAAGAGACACTAAGACTGTATCCACCCGCTCCTTTGGCTGGACCTCATGAAATCACAGAGAATTGTAATTTAGGTGGATACCAAATCGAAAAAGGAATTTGGCTCATGATGAATATCTGGAAAATCAACAGTGACCCTTGTTTTTGGCCAAATCAGTTGGAGTTTGACCCAGATAAATTTCTCACAACTCACAAAGAGGTTGATATGAAGGGTCAACATTATGATTTGTTACCATTTGGATGTGGTAGAAGAATTTGTCCTGGAATTTCATTTGGCCTCGGAGTAGTTCACTTTGTTTTGGCTCATTTGTTGCACTCCTTTGAAATAATAAATCCATCTGATGAACCAATTGACATGAGTGGAACCCTTGGAATTGTCCATGCTAAAACTACTCCATTAATGGTTATGGTCAAACCACGTTTATTTTCTAATTGTTACGAAACCATAATGTAA 1593 0.4118 MDSILTYLNTTTIIFSLIIITILSYLSLYRPFKVGNNKPREPPLVAGAWPVLGHLPLFHGSRSQPLLHITLAAMADKYGPLFTVKLGSKKIVVLSDSELAKECFTRKDAVASSRPNLVSFERLGYNRAMIGFTPYSPYWRELRKFSNLELLSNRRIELLSHVRISEVRASTKELLNLWSTEKDESGYVLVDIKQWFAELTFNMVLRMVAGKRFFGAMDSESEEKANKFLKTMREMMRLMGLFTVGDAIPSLRWLDLGGHEKAMKKTAMELDKFLTEWLNEHHQKKTTNEERDFIDVMISVLSDAKIHQFDADTITKATTLSMIAGATDTTTVTLTWAMCLLLNNPSKFDKAKEELDKEIGRDQCVQESDINKLRYLQAIVKETLRLYPPAPLAGPHEITENCNLGGYQIEKGIWLMMNIWKINSDPCFWPNQLEFDPDKFLTTHKEVDMKGQHYDLLPFGCGRRICPGISFGLGVVHFVLAHLLHSFEIINPSDEPIDMSGTLGIVHAKTTPLMVMVKPRLFSNCYETIM 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90774g00003 530 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PANTHER CYTOCHROME P450 82C3-RELATED 20 526 - -
Stsc90774g00003 530 SUPERFAMILY Cytochrome P450 48 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 CDD CYP82 79 520 - -
Stsc90774g00003 530 FunFam Cytochrome P450 82C4 33 518 - -
Stsc90774g00003 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Stsc90774g00003 530 Gene3D Cytochrome P450 32 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90774g00003 530 Pfam Cytochrome P450 47 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90774g00003 Stsc-Chr90774 13984 32997 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90774g00003 12 521 Cytochrome P450 AT4G31940 44.914 1.76e-161 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90774g00003 - - adu:107490967 732.25