Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90772g00011 ATGGTCCGTTTGATAGTGTTGTTAGCTTTGTGGCAGACGGCGAATGCGTTGGTGAAACTGCCACCAAATGTTACGGTTCCGGCGGTGATAGGTTTTGGAGATTCCATCATAGACCCTGGCAACAACAATGGCATTAAGACACTCGTCAAATGTAATTTTCCTCCTTACGGAAAGGATTTTCAAGGAGGCCCAACCGGCCGCTTTTGCGACGGAAAAATTCCTACTGATCTTCTTGTTGAAGAATTGGGTATTAAGGAACTTTTGCCAGCATATTTGGATCCAAATCTAAAACCAAGTGACCTTGTTACTGGAGTGTGCTTTGCTTCAGGTGCCACTGGATATGATCCCTTGACGCCAAAAATAACGTCAGTGATACCAATGTCAGAGCAAATAGAGATGTTCAAAGAGTACATAGGGAAGCTTAAACAGATTGTTGGAGAAGAACGAACAAATTTCATTCTAGGAAACAGTCTATTCCTTGTGGTTGCTGGAAGTGACGACATTGCCAACACCTATTTTGTTGCTCGTGTTAGACAACTCCAATATGATATTCCTGCTTACACTGACCTTATGATTAATTCAGCCTCTAATTTCATCAAGGAGCTATATGGACTTGGAGCAAGGAGAATTGGTGTACTGAGTGCACCACCGATTGGGTGTGTGCCGTCACAGAGAACTTTAGGTGGAGGCTTAGAAAGAGAGTGTGCAGAAGATTACAATTATGCAGCAAAATTGTTTAACTCCAAACTCTCAAAAGAATTGGATTCACTTCAAAGCAAGTCACCCAATAGTAGGATCGTTTACATTGATGTTTACAACCCCCTTCTTGATATCATTCTCAACTACCAAAAATATGGCTATAAAGTTGTGGATCTCGGTTGCTGTGGAACCGGGAAACTTGAGGTTGCAGTGTTATGCAACCCTTTGGATGCCACGTGTCCAGATGCTTCTCAATATGTATTTTGGGATAGTTATCATCCAACTGAATCAGTAGCAGAGGGTATAATTAAGCTGCCAAGGAATGAAACGGTGACAGGAATGATATTTTTTGGTGACTCAATAGTGGACACAGGAAGTAACAATGAGTTACCAACATTGGCTAAGTGCAATTTCCCTCCATATGGAAGGGACTTTTTTGGCGGGAAACCAACGGGAAGGTTCTCGAATGGCAAAGTCCCAACTGATTTTATAGCCGAAGAGTTCGGAATGAAAAAGCTGATACCATCATATATGTCTCCAAGACTGCAACCTGCTGATCTCCTTACCGGAGTCAGCTTCGCTTCTGGTGGCTCCGGCTACGATCCTCTGACTGCAAAACTTCTGTTGGTGATACCATTATCAGAGCAACTGCAGCAATTCAAAGAGTACATTGGAAAACTGAAAGCAAATTTTGGAGAAGAAAAAACAAACTTCTTCTTGTCTAAAAGTATGGTATTTTTGGTAGCCAGCAGCAACGACATTGCCAACTCTTATTTCGCAACCGGAATCAGGAAAGCTCAATATGATGTTAACTCCTATACTAATATGTTAGTCCAAATTGCCTCTTCTTTCATTATGGGTTTGAAGTTGTGGATAGGGGATGCTGTGGCACTGGGACTATAG 1602 0.4207 MVRLIVLLALWQTANALVKLPPNVTVPAVIGFGDSIIDPGNNNGIKTLVKCNFPPYGKDFQGGPTGRFCDGKIPTDLLVEELGIKELLPAYLDPNLKPSDLVTGVCFASGATGYDPLTPKITSVIPMSEQIEMFKEYIGKLKQIVGEERTNFILGNSLFLVVAGSDDIANTYFVARVRQLQYDIPAYTDLMINSASNFIKELYGLGARRIGVLSAPPIGCVPSQRTLGGGLERECAEDYNYAAKLFNSKLSKELDSLQSKSPNSRIVYIDVYNPLLDIILNYQKYGYKVVDLGCCGTGKLEVAVLCNPLDATCPDASQYVFWDSYHPTESVAEGIIKLPRNETVTGMIFFGDSIVDTGSNNELPTLAKCNFPPYGRDFFGGKPTGRFSNGKVPTDFIAEEFGMKKLIPSYMSPRLQPADLLTGVSFASGGSGYDPLTAKLLLVIPLSEQLQQFKEYIGKLKANFGEEKTNFFLSKSMVFLVASSNDIANSYFATGIRKAQYDVNSYTNMLVQIASSFIMGLKLWIGDAVALGL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90772g00011 533 FunFam GDSL esterase/lipase APG 338 524 - -
Stsc90772g00011 533 CDD SGNH_plant_lipase_like 27 336 IPR035669 -
Stsc90772g00011 533 Pfam GDSL-like Lipase/Acylhydrolase 348 516 IPR001087 GO:0016788
Stsc90772g00011 533 Pfam GDSL-like Lipase/Acylhydrolase 32 332 IPR001087 GO:0016788
Stsc90772g00011 533 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 347 358 IPR008265 GO:0006629|GO:0016298
Stsc90772g00011 533 Gene3D SGNH hydrolase 339 521 IPR036514 -
Stsc90772g00011 533 Gene3D SGNH hydrolase 20 338 IPR036514 -
Stsc90772g00011 533 FunFam GDSL esterase/lipase APG 18 337 - -
Stsc90772g00011 533 PANTHER GDSL ESTERASE/LIPASE EXL3 11 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90772g00011 Stsc-Chr90772 53177 60209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90772g00011 341 494 Pollen Coat Proteome AT1G75910 46.753 1.85e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90772g00011 - - twl:120008416 689.493