Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90771g00011 ATGGAAACTCTGCCCTTAACAGATCAACGCTATGAACTTGTTGAAATTGATCTGTCTGATAGCGAAATTGTACAATTATGGGAGGGAAAGAAGTTTCTAAATAAGTTAGAGCACTTGACTCTGTTCTCCTGCGAAAAGTTGAAGCAAACACCAGATCTTTCTGGGGCTCCCAATCTTAAAAGACTTCATATTCAACATTGTCCTCAGTTGAATTATATTCACCATTCTCTTACCCAGCACAAGAGCCTTGTTGAATTGAATTTAAGTCTATGCTGGAGTCTTGAAACAGTTGGAGATAAATTGGAGATGAGTTCACTCAAGAAACTAGATCTACAAGAGTGCACTAGTTTGAGAAGAGTGCCAGAATTTGGGGAATGCATGAAACAGTTATCGATTCTTACTTTGAAACTTGAAGGCATAGGAGAGCTACCCAGTACGTTTGGAAATTTGGTTGGCCTCACTGAGTTGTACTTAGATGTACAGTATATTGGTCGCCCCATATCACTTGGATGTTTCCGTTGCCTAAACAAGTTCGAGTTACAATACAGGCATGAAATCCAAAATAGAGATGTACCTTTGAGTTCTCTGTCTCTTGCAACCTCTTTGACTAGTCTGACATTAAGAGATTGTTTTCTCGAATCTCAAGAGTCGATCCCTCACTACGATCTTGGCCACTTACCGTTCCTGACGGAGTTGGATTTATCGTTGAACGATTTTAAAAGAGTTCCGATAAGTATCCATCGACTCCCCAAACTTAGACGGCTGAAGCTAAATAATTGCTATGATATGGAGGTTTTGCCAGATCTTCCATCAAGTCTAAGAGTATTAGAAGCAAATGGTTGTGGTTCACTAGATGCATCCAATGTGAATGATGTCATATCAAAGGCGTGTTGTGTCTTTGCAGAATCAGCTACCCAAGATCGTGAAGACATCTTTCAAATTGTGATCCCTGGGAGGGAAATTCCAGCATGGTTTGAGCATCAGGAACAAGGTAACGGAGTATCACTCTCATGTCCTTCAACTAAAACCATGGCATTTTCTCTCTGTTTCGTATTTGATGCTGGAATCTACGGAACGGTATTTTCAATGATCTGCTGCAATGGTCAAGAATTCATCAACGAGAGTTTATTAAAGGAGTTTCCCATCATGTTTCCTTGGAATATGGGCATTGTCCTGAATGGTTACTATGTTAGTAACCTGTTAGGCCAACACAATCGCTTCCATCTCCTATTTCCCCGTTATACTTATTACAATAATAATAATAATAACTGTGTAAAGAGATCTGCAGCACATTGGGTGTGTAACCAAGACATTCAAGAAAAGAAAAGCAACTCTTCAACTGAGTAA 1347 0.3964 METLPLTDQRYELVEIDLSDSEIVQLWEGKKFLNKLEHLTLFSCEKLKQTPDLSGAPNLKRLHIQHCPQLNYIHHSLTQHKSLVELNLSLCWSLETVGDKLEMSSLKKLDLQECTSLRRVPEFGECMKQLSILTLKLEGIGELPSTFGNLVGLTELYLDVQYIGRPISLGCFRCLNKFELQYRHEIQNRDVPLSSLSLATSLTSLTLRDCFLESQESIPHYDLGHLPFLTELDLSLNDFKRVPISIHRLPKLRRLKLNNCYDMEVLPDLPSSLRVLEANGCGSLDASNVNDVISKACCVFAESATQDREDIFQIVIPGREIPAWFEHQEQGNGVSLSCPSTKTMAFSLCFVFDAGIYGTVFSMICCNGQEFINESLLKEFPIMFPWNMGIVLNGYYVSNLLGQHNRFHLLFPRYTYYNNNNNNCVKRSAAHWVCNQDIQEKKSNSSTE 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90771g00011 448 Pfam C-JID domain 316 397 IPR045344 -
Stsc90771g00011 448 PANTHER LEUCINE-RICH REPEAT-CONTAINING 12 213 - -
Stsc90771g00011 448 SUPERFAMILY L domain-like 11 280 - -
Stsc90771g00011 448 Gene3D Ribonuclease Inhibitor 3 125 IPR032675 -
Stsc90771g00011 448 Gene3D Ribonuclease Inhibitor 126 296 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90771g00011 Stsc-Chr90771 55413 56837 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90771g00011 1 255 WRKY Transcription Factor Family AT4G12020 29.658 2.49e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90771g00011 - - ahf:112797503 469.159