Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90771g00006 ATGCATCGTAGCAGCCTTGAACGAGTTTGGCATGGAAAAAAGTTTTTGGAAAAGCTGAAGTACCTGGATTTGAGTAACTCCAGGAACCTAAAGCAGACACCTGATTTTTCCGGGGTTCCCAATCTCGAAACACTTAATCTTCAAGGTTGTGATAGCCTAACTGAAGTTCATGAGTCTCTCATTCACCACAAGAACCTTGTTCACTTAAATCTGAGCTATTGTGAAATGCTTAAAGCTCTTCCAGGTAAATTGGAGATGAGTTCCTTGAAGGAGCTAATCATTGAGCATTGTGAGAGTTTCGAAAATCCCCCAGAATTCGGGGAATGCATGAGAGAATTGTCAAGGCTTTCTCTAAGTGGAACTCCTATAGGAAAATTACCCTCATCACTTGGAAATTTAGTTGGCCTTGAAGATTTGAACTTAAACGGTTGTGGAAACCTTGATTCTGTTCCTGATACCATTCATAGGTTGAAGTCCCTCAAGAACTTGGATCTTGGCTCTTGCTATAACCTTCATGGATTACCATCTTCAATTTCAAGCCTCCCTTTGCTCTATAATCTAAACTTGAGTGGCTGTTACCATAGTGAAATATCTTTCTCTCATGATCTGTTTTGCTACTTCCCATCTTTGATGCATTTGGATCTTAGTGGTCACAGGTTTGTCAACATCCGCATAAACATTCATGAACTTTCCAAGCTTAGATCCCTTAAGCTAAATGGATGCAGCCGTCTTCATTTTCTGCCAAAACTTCCACCTAGTATTAGAGAATTAGAAGCATATGGGTGTAACTCACTGAACACATTTGAATCCAATGTTTTATCAACCATTTGCAATGCCTTTGAATCTTCTAGTAGCCAAGATCAAGAAAATGAAGGTGTGATCATGCAAATGCTGATCCCGGGGAATGAAATTCCACCATTTGTCCATTATCAAGAGGATGGTAGTGAGGTAGCTCTAGGACCATATCCAAGTGATTGCAGTCTGAATAAAAACTCAAAGGGCATTGTATTATGTTTCTTGTATTATACAATGCCTAATGCAATAAATAGATCAGTGTTGTTGAAATTGTGTGTTAGTAGTAATGGTAATAGATTCATCATTCCTTGGAGAACATATAGAATGTATAGAGGTTATCACCTTTACATTCTCTGCTTGAGGAATGATTACTTCAGGGAAGAATTTCACCGAGATGCGAGGTTTAAACTACAGATTTCGGCAGAGGAGGTGCGTCATGAATATGAACCTGAATTTGATCCTGAAGATAATTTTTATGCTCCTTATTATTTTACCAAAATATTGAGCGCTGGCTGGGTGCATATCGAGGATATAGAAGACTTGAACAAAAGTGAGATTGAAAGGCAAAGGAGGGAAGGACAAGGAGTGTTTGACTTGAATAAAATCGTTGAGATGGTGGATTTATGTGAGTGA 1428 0.3887 MHRSSLERVWHGKKFLEKLKYLDLSNSRNLKQTPDFSGVPNLETLNLQGCDSLTEVHESLIHHKNLVHLNLSYCEMLKALPGKLEMSSLKELIIEHCESFENPPEFGECMRELSRLSLSGTPIGKLPSSLGNLVGLEDLNLNGCGNLDSVPDTIHRLKSLKNLDLGSCYNLHGLPSSISSLPLLYNLNLSGCYHSEISFSHDLFCYFPSLMHLDLSGHRFVNIRINIHELSKLRSLKLNGCSRLHFLPKLPPSIRELEAYGCNSLNTFESNVLSTICNAFESSSSQDQENEGVIMQMLIPGNEIPPFVHYQEDGSEVALGPYPSDCSLNKNSKGIVLCFLYYTMPNAINRSVLLKLCVSSNGNRFIIPWRTYRMYRGYHLYILCLRNDYFREEFHRDARFKLQISAEEVRHEYEPEFDPEDNFYAPYYFTKILSAGWVHIEDIEDLNKSEIERQRREGQGVFDLNKIVEMVDLCE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90771g00006 475 Gene3D Ribonuclease Inhibitor 104 291 IPR032675 -
Stsc90771g00006 475 Gene3D Ribonuclease Inhibitor 5 103 IPR032675 -
Stsc90771g00006 475 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 86 182 - -
Stsc90771g00006 475 SUPERFAMILY L domain-like 3 268 - -
Stsc90771g00006 475 Pfam Leucine Rich Repeat 159 181 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90771g00006 Stsc-Chr90771 24897 43923 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90771g00006 4 214 WRKY Transcription Factor Family AT4G12020 34.703 2.26e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90771g00006 - - aip:107635063 721.85