Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90771g00005 ATGCTTGACTTACACAGAAATTCTGTGAACAGGGACGAGGCAGTACTTGTAGAAAACATTGCTCAACATATATTTGAAACACTGATTCCAAAGTTGCCATCTTCAATGAAGAATCTTGTGGGGATTGAATCAAGAGTGGAACAAGTGATTAGTCTCATAGGTCTCGGGTTGAATGATGTTCGCCATATAGGCATATGGGGAATGGGAGGGATGGGTATGACTACTATTGCTAGAGCAATCTTTGAATGCATTCGAAATAGATTTGAAGTTACTTGCTTTCTTGCGGATGTAAGGGAGCAATGCGAGAAACAAAATGTTGCTCACATACAAAAGCAACTTCTTGATCAAATGAATATAAGTTCAAATGCTGTCCATAACAAAATAATAATCACAACTAGAGACATACACCTGCTAAAGGAACAAGAGGTGCGTGAAATTTATGAGGTTGAAGGGTTAGTAAAAGCTGAAGCCTTTAACCTCTTTTGTCTGAAAGCTTTTAAACACCCGGAACCTACAGAAGGGTTTTTAGATTTGTCCGAAGAATTGGTCAAGTACAGTGGTGGTCTTCCATTGGCACTTAAAGTATTGGGTTCCCATCTTTTTGGTAGATCCATTGAGGTTTGGCGCAGTGCTATTGAAGATGTAAAGAAGTCTTCTCATTCTAAAATTATTGATGTACTGAAAATAAGCTATGATGGTTTACGTTCTATGGAAAAGGACATTTTTCTAGATATTGCTTGTTTCTTTAAAGGACATGAGAAAGATTATGTAACAAAGATATTAGAAGGATGCGGTCATAATGCTGAAATTGGTATTGATATTTTGATTAATAGATCATTGGTTACAATAGATGAAAAAGATAGGTTGGGGATGCATGATCTGGTTGAAGAAATGGGCAAACTCATTGTAATTGAAGAATCTCCAAAGGATGTTAGTAAGCGCAGCAGATTGTGCTGTTACAAGGATATTGAATCTGTACTTGCTCAAAAGAAGGAAATTGAAGCAACTCAGAGCATGGTTCTACATATGAGCTGGCTGGATACTGGAGAGAATTGGAGAGATTTGGATATAAGAGATTCATCTTTCTCAAAGCTACAGCTTCTTATTTTAGATGGCGTGAAAGCTCCCGTTCTCTATAATATTCCTTGTACATTAAAGGTTTTGCACTGGAGAGATTGTCCAATGGAAACTCTGCCCTTAACAGATCAACGATATGAACTTGTTGAAATTGATCTGTCTTTTAGCAGAATTGTACAATTATGGGAGGGAAAGAAGTTTCTAGACAAGTTAGAGCACTTGAATCTGTCCTGCTGCTACAGGCTGAAGGAAACACCAGATCTTTCTGGGGCTCCCAATCTTAAAACACTTAATCTTGGAAAATGTGAGAAGCTGAATTATATTCACCCGTCTCTTACCCAGCACAAGAGCCTTGTTGAATTGAATTTAAGGGAATGTCGGAGTCTTGAAACACTTGGAGATAAATTGGAGATGAGTTCACTCAAGAAACTAGATCTATCCTGGTGCACTAGTTTGAGAAGAGTGCCAGAATTTGAGGAATGCATGAAACAGTTATCGATTCTTACTTTGAAACTTGAAGGCATAGGAGAGCTACCCAGTACGTTTGGAAATTTGGTTGGCCTGACTGATTTGTATGTATATGTACGGGATATTGGCCGTCCCATATCACTTGGATGTTTCCTTTGCCTAAAGAAGTTGTCGTTACACTTAGACGCATACACGGGGCTTAGTCGTGTTCCATACGACTACAGGCATGAAATCCAAAATAGAGATGTACTTTTGAGTTCTCTCTCTGTTCTAACCTCTTTGAGTAGTCTGAAATTAATTCAATGTTTTCCCAAATCTGAAGAGTCGATCCCTCACTACGATCTTGGCCACTTACCGTTCTTGACGAAGTTGGATTTATCAGACAACTATTTTAAAAGAGTTCCGATAAGTATCCATCAACTCCCCAAACTTACACGGCTGCAGCTAAGTTATTGCTCTGAATTGGAGCTTTTGCCAGATCTTCCATCAAGTCTAAGAGTATTACATGCAAGTCATTGTGATTCACTAGATGCATCCAATGTGAATGATGTAATATCAAAGGCGTGTCGTGTCTTCGCAGAATCAGCTACCCAAGATCGTGAAGACGTCCTTCAAATGGTGATCACTGGGATGGAAATTCCAGCATGGTTTGACCATCGGGAACAAGGTAACGGAGTATCAGTCCCATTCCGGCATAATTTCCCTTCAACTAAAACCATGGCACTTTCTCTCTGTTTCGTATTTGATGGTCGAAACCACCAAATGAGACCTTCAGTGATATGCTGCAATGGTAAAGAATTCATCAACAAGAGTTTATTAAAGGTGTTGCCCTGGATGTATTTTGGGCATATGTACATTGTCGTCCTGAATGGTTACTATTTTAGCAACCTGTTAGGCCAAGACAATCGCTTCCATATCCTATTTTCCAATAATACTTATACTCATTATAATAATAATAATAATATCCGTGTATGGAGATCTGCAGCACATTGGGTGTGTAACCAAGACATTCAAGTTCCAGATTTCAAGAAAAGAAAAGCAACTCTTGAACTTAGTAAGCAAGACATCATGCCACTCTATGAACAAGAGGAAGGGTGTGCTGCCACAGCCGAGGGCGCCATTAGCTTATGA 2676 0.3913 MLDLHRNSVNRDEAVLVENIAQHIFETLIPKLPSSMKNLVGIESRVEQVISLIGLGLNDVRHIGIWGMGGMGMTTIARAIFECIRNRFEVTCFLADVREQCEKQNVAHIQKQLLDQMNISSNAVHNKIIITTRDIHLLKEQEVREIYEVEGLVKAEAFNLFCLKAFKHPEPTEGFLDLSEELVKYSGGLPLALKVLGSHLFGRSIEVWRSAIEDVKKSSHSKIIDVLKISYDGLRSMEKDIFLDIACFFKGHEKDYVTKILEGCGHNAEIGIDILINRSLVTIDEKDRLGMHDLVEEMGKLIVIEESPKDVSKRSRLCCYKDIESVLAQKKEIEATQSMVLHMSWLDTGENWRDLDIRDSSFSKLQLLILDGVKAPVLYNIPCTLKVLHWRDCPMETLPLTDQRYELVEIDLSFSRIVQLWEGKKFLDKLEHLNLSCCYRLKETPDLSGAPNLKTLNLGKCEKLNYIHPSLTQHKSLVELNLRECRSLETLGDKLEMSSLKKLDLSWCTSLRRVPEFEECMKQLSILTLKLEGIGELPSTFGNLVGLTDLYVYVRDIGRPISLGCFLCLKKLSLHLDAYTGLSRVPYDYRHEIQNRDVLLSSLSVLTSLSSLKLIQCFPKSEESIPHYDLGHLPFLTKLDLSDNYFKRVPISIHQLPKLTRLQLSYCSELELLPDLPSSLRVLHASHCDSLDASNVNDVISKACRVFAESATQDREDVLQMVITGMEIPAWFDHREQGNGVSVPFRHNFPSTKTMALSLCFVFDGRNHQMRPSVICCNGKEFINKSLLKVLPWMYFGHMYIVVLNGYYFSNLLGQDNRFHILFSNNTYTHYNNNNNIRVWRSAAHWVCNQDIQVPDFKKRKATLELSKQDIMPLYEQEEGCAATAEGAISL 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90771g00005 891 Pfam NB-ARC domain 113 232 IPR002182 GO:0043531
Stsc90771g00005 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 245 IPR027417 -
Stsc90771g00005 891 Gene3D - 26 126 IPR027417 -
Stsc90771g00005 891 SUPERFAMILY L domain-like 346 691 - -
Stsc90771g00005 891 SUPERFAMILY "Winged helix" DNA-binding domain 221 326 IPR036390 -
Stsc90771g00005 891 PRINTS Disease resistance protein signature 495 511 - -
Stsc90771g00005 891 PRINTS Disease resistance protein signature 186 200 - -
Stsc90771g00005 891 PRINTS Disease resistance protein signature 62 77 - -
Stsc90771g00005 891 Pfam C-JID domain 724 797 IPR045344 -
Stsc90771g00005 891 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 117 IPR044974 GO:0006952
Stsc90771g00005 891 Gene3D Ribonuclease Inhibitor 521 703 IPR032675 -
Stsc90771g00005 891 Gene3D Ribonuclease Inhibitor 313 520 IPR032675 -
Stsc90771g00005 891 Gene3D - 152 235 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90771g00005 Stsc-Chr90771 19531 23113 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90771g00005 40 538 WRKY Transcription Factor Family AT5G45050 29.701 3.35e-60 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90771g00005 - - adu:107485884 938.717