Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90771g00002 ATGCCGCTGGATCCACCGACGATGAAGACATGGCGATTTTTTATAATAATAAAAAGAAGAAAAAGAGAAAAAATAAGGTGCAATGGTCACAGGAAAGGACTAAGGAATGACCACGAACTCGTGCAAAGTATTGCTCAACATGTACATGAAGAATTGATCAGAAAATTGCCATCTTCCATGAAGAATCTGATAGGGATTGATTCGAGGTATAACAAAGTTATTGAACTCATTGGCAAAGAGAAGGATGATGTTCGCTTCATAGGCATATGTGGAATGGGCGGCATAGGTAAGACAACTGTTGCCTCCAGAGTCTGGGAAGGCATCCAAGGTGAATTTGAAGCGAGTGGTTTTTTTGCCGATGTAAAGGAGATCTTTGAGAAAGAAGGCATTGTTGCAGCACAGAAAAGACTTCTTAATTGTATGAGGATAGAGGCAATTGGTTTTTCTAATGAGAATGACGGAAGACGTATAATTCATGACTCTTTATGCAATAAGAAGGTCTTGCTTGTCCTCGATAATGTAGACACGAAAGTCCAATTGCAGAATTTGGCTGGTGAAAAAGGTTGGTTTGGTTCTGGAAGCAGAATAATATTCACAAGCAGAGATAAAAATTTACTGCATGAGTGGTGTGGAGAGAATGAAATTTACATGCTCAAAGGGTTAGAGCAAATAGAAGCACTTCAACTTTTTAGTTTGAATGCTTTCGGATGCTTAAATCCTGAAGAAGAGAATGTGAATATGTCCAAAGAAGTAGTTGGATATTGTGATGGTCTTCCATTAGCACTAAAAGTATTAGGTTGCCATTTTCGTGGAAGACCCATTGATATATGGCGTGATGATATTCTCAAATTAAAGAGGGGTCTTAAAAAAGATATTTTTTGTAAATTGAAAATAAGTTATGATGGTTTAGATAGGATGGACAAAGACATCTTTTTAGACATCGCTTGTTTTTTCAGAGGAGAGCATGTAGATGTTGTTCAAAACATATTACAACATTGTGATTATAATGCTAAAAGTGGTATAGCTACTTTGATCGATAGATCTTTGGTCACTCTAAATGAGAATGGTAGGTTGGAGATGCATGATTTGCTTGAAGAAATGGGCAAACAAATTGAAATTGAAAAATCTCCATATGATCCTGACAAGCGTGACAGGTTGTGGTCTGCCAAGGATGCTGATGATGTACTAACACAAGAACAGGAAACTGAAACTACTCGTAGCATCGTTCTAAAGCTAAACAGTCAGTATAACATTTTGGATAAACACTTTGAAAGGCGTTGGAGAGATTTAGCTTTCTCAAATATACGCCGGCTAAAGCTCCTCATCTTAAATGGAGTGAAAGTTCCCATTGTAACAAAGATTCCTATCTCATTAAAAGTTTTGCACTGGATGTTTTTTCCAATGAAAAACCTGCCCCTCGAAGATAAACGGTACTATAAACTTGTTCAGATTCGTCTGTCTTTGGGTGACGATTTAAAACACGTGTGGCAGGGAAATAAGCGTCTAGAAAATCTGAAGTCCTTACATCTGTCATGGTGTCGAAATTTGGAGGCAACACCAGATTTTTCAGGGGCTCCCAATCTTGAAATACTTGAGATTCGGAATTGTTATAACCTGGATAAGATTGACCCGTCTCTCGTATGCCACAAGAAGCTTGTTGCATTGACTATATCGAGATGTGCCCGACTTGAAACAATTCCATCTAAATTGGAGATGAGTTCGCTCCAGGAACTAAAACTCGAAGAATGCGACAAGTTGGAGATACTCCCAGAATTCGGAGAATGCATGAGACATTTGTCTAGTCTTACTTTGTGTGTACTACCCATAAAAGAGCTACCCTCATCACTTGGATGTTTAGTTGGCCTATCAGAGTTGAAGATAAGTCGATGCCACGAGCTTACTTGCCTTCCAGACAGCATTCATGGTTTGAAGTCCCTCACACTTCTGGATGTTTTTAGCTGCCCTAGTCTCCTTGCATATCTGCATCTGTTCTCTAGTTTGACCTCTTTGACTAGTCTAACCATACGCAACTGTTATCTAATGGGGCCATTTCCTGACAATGTTGGTCACTTTCAGTGGTTGATAGATTTGGATTTATCTGATAACAATTTTGTCAGTGTTCCAATAAGGATCCATGAGCTTCCCAGGCTTACAAGTCTTAAACTATATGGTTGCCGATACCTGAACCTTTTGCCAGAGCTTCCATCAAGTCTAAGAGAATTACACGTACCAGATTGTAAATCACTGCAGGATGCATCCAATGTCAACAATGTTGTATCAAAGTTGTGCTATGCCTTTGCAGACTCATCCATGCATGATGGTGATGTCTTTCAAATGTATATGGCCGGGGAAACAATACCGTCATGGTTTAACCTTCAGGAACAAGGTGATGGAGTATCAGTTCCATTCCTAGATAATTGCGCTTCTGAAACCAAGGTACTTGCTCTCTGTTTCCAAATTTATGGCTATTGGAATGGGCCATTTAAGTTACAGCCTTCCTTGATCTTCAACGGTAAATCCATCAACAAGACTTCAATTCAGATAAGGGCTTCAGGAGGTAATTCTCATCATTTCATTCTCTTCTTGACCAATGACTATTCTCATGAACTCTTGCCGCGCAACTGCTTTGAACTGTTAATTCCGGGTCATAATCTTATGAAAGTAAAGAGCTCTGGGGCCCGTTGGGTGAGTAAAGGAGAGATTGAAGAGTTCATGAAAAGTGAACCTGAAAAGTGA 2736 0.3936 MPLDPPTMKTWRFFIIIKRRKREKIRCNGHRKGLRNDHELVQSIAQHVHEELIRKLPSSMKNLIGIDSRYNKVIELIGKEKDDVRFIGICGMGGIGKTTVASRVWEGIQGEFEASGFFADVKEIFEKEGIVAAQKRLLNCMRIEAIGFSNENDGRRIIHDSLCNKKVLLVLDNVDTKVQLQNLAGEKGWFGSGSRIIFTSRDKNLLHEWCGENEIYMLKGLEQIEALQLFSLNAFGCLNPEEENVNMSKEVVGYCDGLPLALKVLGCHFRGRPIDIWRDDILKLKRGLKKDIFCKLKISYDGLDRMDKDIFLDIACFFRGEHVDVVQNILQHCDYNAKSGIATLIDRSLVTLNENGRLEMHDLLEEMGKQIEIEKSPYDPDKRDRLWSAKDADDVLTQEQETETTRSIVLKLNSQYNILDKHFERRWRDLAFSNIRRLKLLILNGVKVPIVTKIPISLKVLHWMFFPMKNLPLEDKRYYKLVQIRLSLGDDLKHVWQGNKRLENLKSLHLSWCRNLEATPDFSGAPNLEILEIRNCYNLDKIDPSLVCHKKLVALTISRCARLETIPSKLEMSSLQELKLEECDKLEILPEFGECMRHLSSLTLCVLPIKELPSSLGCLVGLSELKISRCHELTCLPDSIHGLKSLTLLDVFSCPSLLAYLHLFSSLTSLTSLTIRNCYLMGPFPDNVGHFQWLIDLDLSDNNFVSVPIRIHELPRLTSLKLYGCRYLNLLPELPSSLRELHVPDCKSLQDASNVNNVVSKLCYAFADSSMHDGDVFQMYMAGETIPSWFNLQEQGDGVSVPFLDNCASETKVLALCFQIYGYWNGPFKLQPSLIFNGKSINKTSIQIRASGGNSHHFILFLTNDYSHELLPRNCFELLIPGHNLMKVKSSGARWVSKGEIEEFMKSEPEK 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90771g00002 911 Gene3D Ribonuclease Inhibitor 412 593 IPR032675 -
Stsc90771g00002 911 Gene3D Ribonuclease Inhibitor 594 763 IPR032675 -
Stsc90771g00002 911 PRINTS Disease resistance protein signature 86 101 - -
Stsc90771g00002 911 PRINTS Disease resistance protein signature 161 175 - -
Stsc90771g00002 911 PRINTS Disease resistance protein signature 500 516 - -
Stsc90771g00002 911 PRINTS Disease resistance protein signature 255 269 - -
Stsc90771g00002 911 Pfam NB-ARC domain 70 270 IPR002182 GO:0043531
Stsc90771g00002 911 SUPERFAMILY "Winged helix" DNA-binding domain 292 396 IPR036390 -
Stsc90771g00002 911 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 592 IPR044974 GO:0006952
Stsc90771g00002 911 SUPERFAMILY L domain-like 428 752 - -
Stsc90771g00002 911 Gene3D - 220 304 IPR042197 -
Stsc90771g00002 911 Gene3D - 48 215 IPR027417 -
Stsc90771g00002 911 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90771g00002 Stsc-Chr90771 8747 13921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90771g00002 64 750 WRKY Transcription Factor Family AT5G45050 30.282 9.48e-72 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90771g00002 - - adu:107485884 772.696