Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90765g00010 ATGGAAGAGGTTTGGAAGGACATCAACCTTGCTTCCTTGAACGACCACAACACCTCCTCCTCCTCCACCTCCTCCGCCGCCTTCATCTTCCAAGACTTCCTCGCTCGCCCCTTCACCATTAACACCACTTCCGATCCTCCTCCTCCTACTACTACTTCTCCCTCTCCCTCTCCCTCACCGTCTCTCTCCCCCTCTCCTGCACCGCCGCAATCTCTCACTGCTCTCAGCCTGGGTTCTCATCATCGCCATATTAATAACCGCAATCATCATTTCCATCATCAACATCCTGCTCCACCACCACCACCACCACTACCACCTACCTCCACTCCCAAGCTACCTTACCCTTCTTCACCATTATTTGTTGATACCCTGCCTTGCTCTTCCTCTCTCCCCTGCTTCCCCACCACTAAGAGGTTCCCTGAACCCTCTTCTGATTCCTCCCCTACCCTCGACCGCCGCAACAAGCGCATGATCAAGAATCGTGAATCCGCTGCCCGATCACGCGCCCGAAAGCAGGCATATACGAACGAGTTACAGCTTAAAGTGGACCACTTGCTTGAAGAAAATGCAAGACTCAAGAGGCAGCAACAACAGCTATGTGAAGCAGCGGCGAATCAGCAAAAGAAGAAGAGTACTCTATACCGAACATTTACGGCACCGTTTTGA 666 0.524 MEEVWKDINLASLNDHNTSSSSTSSAAFIFQDFLARPFTINTTSDPPPPTTTSPSPSPSPSLSPSPAPPQSLTALSLGSHHRHINNRNHHFHHQHPAPPPPPPLPPTSTPKLPYPSSPLFVDTLPCSSSLPCFPTTKRFPEPSSDSSPTLDRRNKRMIKNRESAARSRARKQAYTNELQLKVDHLLEENARLKRQQQQLCEAAANQQKKKSTLYRTFTAPF 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90765g00010 221 CDD bZIP_plant_BZIP46 152 206 - -
Stsc90765g00010 221 MobiDBLite consensus disorder prediction 133 171 - -
Stsc90765g00010 221 MobiDBLite consensus disorder prediction 148 168 - -
Stsc90765g00010 221 MobiDBLite consensus disorder prediction 39 74 - -
Stsc90765g00010 221 MobiDBLite consensus disorder prediction 133 147 - -
Stsc90765g00010 221 SMART brlzneu 148 212 IPR004827 GO:0003700|GO:0006355
Stsc90765g00010 221 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 220 IPR043452 GO:0003700|GO:0045893
Stsc90765g00010 221 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 150 210 - -
Stsc90765g00010 221 Gene3D - 151 210 - -
Stsc90765g00010 221 Coils Coil 175 209 - -
Stsc90765g00010 221 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 150 199 IPR004827 GO:0003700|GO:0006355
Stsc90765g00010 221 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 155 170 IPR004827 GO:0003700|GO:0006355
Stsc90765g00010 221 MobiDBLite consensus disorder prediction 95 113 - -
Stsc90765g00010 221 SUPERFAMILY Leucine zipper domain 152 201 IPR046347 GO:0003700|GO:0006355
Stsc90765g00010 221 Pfam bZIP transcription factor 151 208 IPR004827 GO:0003700|GO:0006355
Stsc90765g00010 221 MobiDBLite consensus disorder prediction 42 67 - -
Stsc90765g00010 221 MobiDBLite consensus disorder prediction 89 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90765g00010 Stsc-Chr90765 36073 37287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90765g00010 1 197 bZIP Transcription Factor Family AT3G56850 32.195 2.48e-20 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc90765g00010 bZIP_1 1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90765g00010 K14432 - gmx:102660922 162.155