Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90765g00003 ATGAGGTTTATCTTTGAAGCTCATCCTCCTCAATTGGGTCTAGTCATTCTTCTTATTTCATGTTCTGTCACAGCTATGACCTGTCAAAAGCAGAATGAAAGTGTGCCAGCAATCTTTGTGTTTGGGGACTCAATAGTGGACACAGGTAACAACAACTACATCACAACCATTGCCAAATGCAATTTCCCACCATATGGTAGAGACTTTGCTGCTGGAGGATTTCAACCATCAGGGAGGTTCAGCAATGGTTTAGTCCCTTCAGACTTCATTGCTGAAATATTTGGAGTCAAAAATACTTTGCCACCTTATCTGGACCCAAATCTGCAACTCCAAGAACTTCTCACAGGTGTAAGTTTTGCCTCGGGCGGCGCCGGATATGATCCTCTTACCTCAAAAATACCGGGTGCATTGTCACTGTCAGACCAATTAGACAAATTGAGGGAGTATCAAAAGAAGATAAGGGAAGCAGTTGGAGAGAACAGAACAGAAAGAATAATATCAAAGAGCATATACATAGTGTGCCTAGGAAGTGATGACATTGCTAACACTTACATTCCATTTAGAAGATCAGAGTATGATATTCCATCTTACACAGACTTAATGGCCTCACAAGCCTTCAACTTCTTAAAGGAGCTTTATGGGGTTGGAGGTAGGAGGATTGGAGTAGTGAGTATGCCAATTATAGGGTGCGTGCCGTCACAGAGAACAACCGGTGGAGGCATAAGGAGAGCATGTTCAGATTCTGAAAATGAAGCAGCAATTCTATTCAACAAGAAACTCCTCTCACAAACCAAGCTCCTCAATAAACAGTTTCCAGATGCTAGGATCGTCTACCTTGATATTTACAACATATTAGATCAGATGATTCAAAACCCAGCTAAATATGATTTTGAAGTAGTAGACAGAGGATGCTGTGGAACAGGAACTATAGAAGCAAGCTTGTCCTGCAACTCCCTCAGCATAAACACGTGTACAGATGAATCAAACTATATATTCTGGGATGCTTACCACCCTACGGAAAAAGCATATAAAATTATCACTTCTATGGCCGTATGGGTGCGTTTGGTAGCTGAGACTGAGATTGAGACTGGAAGACTAAGATTTAGTATTGTGTTTATTGGATAG 1125 0.4124 MRFIFEAHPPQLGLVILLISCSVTAMTCQKQNESVPAIFVFGDSIVDTGNNNYITTIAKCNFPPYGRDFAAGGFQPSGRFSNGLVPSDFIAEIFGVKNTLPPYLDPNLQLQELLTGVSFASGGAGYDPLTSKIPGALSLSDQLDKLREYQKKIREAVGENRTERIISKSIYIVCLGSDDIANTYIPFRRSEYDIPSYTDLMASQAFNFLKELYGVGGRRIGVVSMPIIGCVPSQRTTGGGIRRACSDSENEAAILFNKKLLSQTKLLNKQFPDARIVYLDIYNILDQMIQNPAKYDFEVVDRGCCGTGTIEASLSCNSLSINTCTDESNYIFWDAYHPTEKAYKIITSMAVWVRLVAETEIETGRLRFSIVFIG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90765g00003 374 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 38 49 IPR008265 GO:0006629|GO:0016298
Stsc90765g00003 374 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Stsc90765g00003 374 Coils Coil 139 159 - -
Stsc90765g00003 374 PANTHER GDSL ESTERASE/LIPASE EXL3 20 348 - -
Stsc90765g00003 374 CDD SGNH_plant_lipase_like 36 346 IPR035669 -
Stsc90765g00003 374 FunFam GDSL esterase/lipase APG 27 353 - -
Stsc90765g00003 374 Gene3D SGNH hydrolase 24 354 IPR036514 -
Stsc90765g00003 374 Pfam GDSL-like Lipase/Acylhydrolase 38 347 IPR001087 GO:0016788
Stsc90765g00003 374 SUPERFAMILY SGNH hydrolase 37 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90765g00003 Stsc-Chr90765 7009 9332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90765g00003 11 351 Pollen Coat Proteome AT1G75910 36.994 9.31e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90765g00003 - - gmx:102668883 479.559