Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90764g00012 ATGGATTCACAAACCTTGGCTGTGCATGTACCCTTGAGTTCAAAGTCCGATAAGATTGCTTTGCTTGCTTTAAAGGACAAGCTTACCAATGGCGATCCTCATGCTCTGCCATCATGGAATCAGTCTCTCCATTTCTGTGCATGGGAGGGTGTTACATGCAGTCGCCCACACATGAGAGTCTCAGCCTTGCAATTACAAAATCAATACTGGGGTGGTACTCTTGCACCATCCTTGGGAAATCTAACATTCCTCAAGGAGATCAATCTTACCAACATCAACTTGCATGGAGAGATTCCAAGAGAAGTTGGTCATTTAAAGAGGTTACATATTCTTGACTTGAGGCAAAATAATCTTCAAGGCCAAATTCCTATGGAGATGATAAATTGTTCAAGCCTTCAAGTAATTGCGTTGTATTACAATAATCTAACTGGCAAAATTCCTTCATGGTTTGGTTCTATGATGCAACTTACTGTACTTGGGCTTGGAGCCAACAGTTTTGTTGGTAGCATCCCAGCTTCTTTGGGGAATCTTTCATCGCTTGAATTGTTGTCAATTGCTTACAATCATTTGGAAGGGTCCATAACTCCAGCTTTGGGTAGGATGTCGATTTTGAAACTTTTGTATATGGGTGTAAATAATTTTTCTAGCCAACTCCCTTCTTCACTTTACAACCTTTCAAATATTCAAGAGCTTTCATTCACGGATAACCAGTTAGTGGGTACTCTTCACTCAAATCTACCTATGGCTTTCCCCAATCTTCAGATTCTTGAATGTGGAGGGAACCGACTCACTGGTACATTCCCATCTTCAATATCCAACCTTTCCGAACTGCAAGTGTTTGATTCATCCGAAAATGATTTTCATGGACCGATTTCTCCTACCCTTGGTAGTTTACCCAAACTTCAGCTTTTTAACGTCGGTCATAACAGATACGGAAGTGGAAGAGCTGACGATTTGGATTTCCTTTCTTCCTTAAAGAATTGTACTCAATTGCAAGTACTTGCCATTGAAAACAATTATTTGGGGGGTGTATTGACAGATCTCATAGGCAACCTATCAAGCAATCTCTTTTGGCTTTCTATGGGGGCCAATCAAATATATGGAAGGATACCTGAAGCAATTGGAAAACTAATCAACCTAACATTGCTTGGTATGGATGCAAATTCCCTTGAGGGAACAATTCCATATACAATTGGAAAGCTCAAGAATCTGGTAGGGTTGTCGCTGGGGGTAAATAAATTGCTTGGCAACATTCCTCTTGTCATTGGTAACCTTACTATGTTGTCTGAAGTTGGTCTGGAATCAAATAAATTTGAAGGATTCATTCCTTTTACACTTGCAAATTGCACCAAGATGGAGAGATTTTATGCTCATGATAACAACTTAAGTGGTAATATACCCACCCAAATATTCAGCTACCAACAAGGTTTAGTAGTGTTGTCCTTACATTCCAACTCATTTACTGGCCCAATTCCTTTTGATCTTGGCAACTTGAAGCATCTTTCCATCCTCCGTTTGCAAGAAAACAAGCTGACTGGTGAGATTCCCATGGGACTTAGTGCTTGCTCTGCTTTAACAGAGCTCGCACTAGGAAGAAACTCGTTTCATGGAAGTATACTTTCATTATTGGGATCTCTACTATCCCTTGAAATCTTAGACCTTTCTCATAACAACTTCTCAAGTACAATCCCGCATGAACTTGTGAATCTCACGTTGCTGAATACTTTGAACTTATCTTTCAACAATCTCTCTGGTGAAGTCCCAGTAGGAGGCGTATTTAAAAACATCACAGCAATATCACTCACTGGAAACAAACATCTTTGTGGTGGGATTCCTCAATTGAATCTTCCTCCATGCCCTGCGTTGCCTTTACATAAGAAACACAAGAGATCGATTAAGAAGAGAGTCATCCTCACCATTGCATTTGCAGGGTTTCTAATCATTTTTGTAACTTTTATCAGCATATATCTTCTCAAGAAAAAAGCAAAAAAGTTATCCATTAAATCCCTAGCTTTGCAATATGGCTATGTGAAGGTTTCCTATGGAGAGCTACATCAAACAACCAATGGATTTTCTTCATCCAATTTAGTTGGCACTGGAAACTTTGGTGCTGTGTATAGAGGAACCCTTGATCATTTTGAGAGACCTGTGGCTGTGAAGGTGTTGAATCTTCAAACACGTGGGGCATCAAAGAGTTTCGTGTCCGAATGCAAAGCTTTAGGAAAAATCAAGCACAGAAACCTTGTCAGCATACTGACTTGTTGTTCAAGCGTTGATTACAAAGGGAATGATTTCAAGGCCATAGTATTCGAGTTCATGTCTAATGGGAGTCTTGAAACCTTGTTGCACAACAATGTTGAAGATAGCGAGTCCACAAATCTGAGTCTCAACCTTGTACAAAGGGTAAACATTGCTCTTGATGTGGCTTTCGCATTGGATTATCTTCACAATGATTCATGGGAAGCTGTAGTTCATTGTGATATCAAGCCAAGCAATGTTCTACTTGATGATGACATGGTTGCCCACTTGGGAGACTTTGGATTAGCTAGACTCATTAATGATGCCACAAGCCATTCTAGCAGTAATCAAGCAAGCTCCTCTGCAATTAAGGGAACCATTGGATATATTCCACCAGAGTATGGAGCAGGCAGCTCAGTGTCAATAGAGGGAGACATGTATAGCTATGGAATTTTTCTTCTAGAGATGGTCACTGGAAAGAAGCCAACTGATGGTATGTTTGGTGAAGATCTAAGCTTACACATGTTCTGTAACATGGCAATTCCAGAAAGAATCAGTGAGATTGTTGATTCAAGATTGCTCATTCCATGGCCAATTGATGAACAAGAAAGAAGGGGGGTCAGAAGACATCAAAACATGGAAGAGAATTTTACTGAGGAGTGTGTAGCATCCTTTGCCAGGATTGGAGTTGCATGTTCTCAAGAGATTCCTAATGAGTGGATGAGCATAAAAGATGGCATAACTGAATTGCATTCAATCAAGCAAAAGCTATCCTGCTAA 3018 0.4016 MDSQTLAVHVPLSSKSDKIALLALKDKLTNGDPHALPSWNQSLHFCAWEGVTCSRPHMRVSALQLQNQYWGGTLAPSLGNLTFLKEINLTNINLHGEIPREVGHLKRLHILDLRQNNLQGQIPMEMINCSSLQVIALYYNNLTGKIPSWFGSMMQLTVLGLGANSFVGSIPASLGNLSSLELLSIAYNHLEGSITPALGRMSILKLLYMGVNNFSSQLPSSLYNLSNIQELSFTDNQLVGTLHSNLPMAFPNLQILECGGNRLTGTFPSSISNLSELQVFDSSENDFHGPISPTLGSLPKLQLFNVGHNRYGSGRADDLDFLSSLKNCTQLQVLAIENNYLGGVLTDLIGNLSSNLFWLSMGANQIYGRIPEAIGKLINLTLLGMDANSLEGTIPYTIGKLKNLVGLSLGVNKLLGNIPLVIGNLTMLSEVGLESNKFEGFIPFTLANCTKMERFYAHDNNLSGNIPTQIFSYQQGLVVLSLHSNSFTGPIPFDLGNLKHLSILRLQENKLTGEIPMGLSACSALTELALGRNSFHGSILSLLGSLLSLEILDLSHNNFSSTIPHELVNLTLLNTLNLSFNNLSGEVPVGGVFKNITAISLTGNKHLCGGIPQLNLPPCPALPLHKKHKRSIKKRVILTIAFAGFLIIFVTFISIYLLKKKAKKLSIKSLALQYGYVKVSYGELHQTTNGFSSSNLVGTGNFGAVYRGTLDHFERPVAVKVLNLQTRGASKSFVSECKALGKIKHRNLVSILTCCSSVDYKGNDFKAIVFEFMSNGSLETLLHNNVEDSESTNLSLNLVQRVNIALDVAFALDYLHNDSWEAVVHCDIKPSNVLLDDDMVAHLGDFGLARLINDATSHSSSNQASSSAIKGTIGYIPPEYGAGSSVSIEGDMYSYGIFLLEMVTGKKPTDGMFGEDLSLHMFCNMAIPERISEIVDSRLLIPWPIDEQERRGVRRHQNMEENFTEECVASFARIGVACSQEIPNEWMSIKDGITELHSIKQKLSC 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90764g00012 1005 Gene3D Ribonuclease Inhibitor 13 164 IPR032675 -
Stsc90764g00012 1005 FunFam LRR receptor-like serine/threonine-protein kinase EFR 321 624 - -
Stsc90764g00012 1005 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 773 1005 - -
Stsc90764g00012 1005 Pfam Leucine rich repeat N-terminal domain 15 54 IPR013210 -
Stsc90764g00012 1005 Gene3D Phosphorylase Kinase; domain 1 653 772 - -
Stsc90764g00012 1005 SMART LRR_typ_2 498 522 IPR003591 -
Stsc90764g00012 1005 SMART LRR_typ_2 105 129 IPR003591 -
Stsc90764g00012 1005 SMART LRR_typ_2 546 569 IPR003591 -
Stsc90764g00012 1005 SMART LRR_typ_2 570 595 IPR003591 -
Stsc90764g00012 1005 SMART LRR_typ_2 177 201 IPR003591 -
Stsc90764g00012 1005 SUPERFAMILY L domain-like 354 609 - -
Stsc90764g00012 1005 ProSiteProfiles Leucine-rich repeat profile. 548 571 IPR001611 GO:0005515
Stsc90764g00012 1005 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 218 994 - -
Stsc90764g00012 1005 SUPERFAMILY Protein kinase-like (PK-like) 673 933 IPR011009 -
Stsc90764g00012 1005 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Stsc90764g00012 1005 Gene3D Ribonuclease Inhibitor 165 317 IPR032675 -
Stsc90764g00012 1005 Gene3D Transferase(Phosphotransferase) domain 1 773 1004 - -
Stsc90764g00012 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Stsc90764g00012 1005 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515
Stsc90764g00012 1005 FunFam LRR receptor-like serine/threonine-protein kinase EFR 661 772 - -
Stsc90764g00012 1005 Pfam Protein kinase domain 693 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90764g00012 1005 Gene3D Ribonuclease Inhibitor 318 623 IPR032675 -
Stsc90764g00012 1005 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 55 320 - -
Stsc90764g00012 1005 SUPERFAMILY RNI-like 63 383 - -
Stsc90764g00012 1005 ProSiteProfiles Protein kinase domain profile. 691 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90764g00012 1005 SMART serkin_6 691 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90764g00012 Stsc-Chr90764 66835 70178 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90764g00012 12 1003 Receptor kinase-like Gene Family AT3G47570 43.300 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Stsc90764g00012 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90764g00012 - - ahf:112766919 1431.39