Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90764g00011 ATGGAGAACAATTCCCTTGAGGGAACAATTCCATATTCAATTGGAAAGCTAAAGAATCTGGTACAATTGACGTTGGAGGGAAATAAGTTGTTTGGCAACATTCCTCTTGTCATTGGTAACCTTACTATGTTGTCTTTACTTGATCTGAGCTCAAATAAATTTGAAGGATTCATTCCTTTTACACTTGCAAATTGCACCAACATGCAGAAATTTTATGCTAATAATAACAACTTAAGTGGTAATATACCAAATCAATTATTTGGCTACCAACGAGGTTTAGTAGTGTTGTCCTTGACCTCTAACTCCTTTAATGGCCCCATTCCTTCTGATCTTGGTAACTTGAAGCATCTTTCCATCCTGAGTTTGGAAGAAAATAGGTTGATTGGTGAGATTCCCATGGGACTTAGTGCTTGCTCCGCTTTAACGGAGCTTACACTAGAAAGAAACTCCTTCAATGGAAGTATACCTTCATTCTTGGGATCTCTACTATCCCTTGAAATCTTAGACCTTTCTCTAAACAACTTCTCAAGTACAATTCCTCATGAACTTGTGAATCTCACGTTGTTGAATATTTTGAACTTATCTTTCAACAATCTCTCAGGTGAAGTCCCGGTAGAAGGTGTATTTAAAAAAATCACGGCAATATCACTCACTAGAAACAAACATCTTTGCGGTGGGATTCCTCAATTGAATCTTCCTCCATGCCCTGTGTTGCCTTCACAGAAGAAACACAAGAGATCAATTAAAAGGAGAGCAATAATCCTCATCGTTGCATTTGGAGGGGTCCTAATCTCTTTTATAACGTTTATCAGCATATATCTTCTCAAGAAAAAGGCAAAAAAGTTATCATCTACTTCTCTAGCTTTACAGTATGGCTATGTGAAGGTTTCTTATGGAGAGCTACATCAAGCAACAAATGGATTTTCTTCATCCAATTTAGCTGGCAAAGGAAACTTTCGTACTGTGCATAGAGGAACCCTTGTCTATTTTGAGAGACCTGTTGCTGCCAAAGTGTTGAACCTTCAAACACACGGGGCGTCAAAGAGTTTTGTGGCTGAATGCAACGCTCTAGGAAAAATCAAGCACAGAAACCTTGTCAGCATACTGACTTGTTGTTCAAGTGTTGATTACAAGGGAAATGATTTCAAGGCCATAGTGTTCGAGTTCATGTCTAATGGGAGTCTAGAAACCTTGTTGCACAACAACGTTGAAGATAGCGAGTCCACAAATCTGAGTCTCAACCTTATACAAAGGGTAAACATTGTTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAGTGATTCATGGGAAGCTGTAGTTCATTGTGATATTAAGCCAAGCAATATTCTACTTGATGATGACATGGTTGCCCACTTGGAAAACTTTGGATTAGCTAGACTTATTCATGGTCCTGCAAGCCGTTCTAGCAGTGGTCAATCAAGCTCCTCTGCAATTAAGGGAACCATCGGATATATTCCACCAGAGTATGGAGGAGGTGGATCAGTGTCAAGAGAAGGAGACATGTATAGCTACGGAATTCTTCTTTTGGAGATGCTCACTGGAAAGAGGACAACTGATAGCATGTTTGGTGAAGGTCTAAACCTTCACAGTTTCTGTAACATGGCAATGGCAGAAGGAATCATTGAGATTGTTGATTCAAGATTGCTCATTCCAATTGATGAACAAGATCAGGGAAGAAGGGTCATCACAAGGCAGCAAAACATGGAAGACACCGTTCGTGAGTGTCTTGTGTTGTTTGCTAGGATTGGGATTACATGTTCTAAGAATCTCCCTCTCGGCGAATGGGCTTAA 1815 0.3972 MENNSLEGTIPYSIGKLKNLVQLTLEGNKLFGNIPLVIGNLTMLSLLDLSSNKFEGFIPFTLANCTNMQKFYANNNNLSGNIPNQLFGYQRGLVVLSLTSNSFNGPIPSDLGNLKHLSILSLEENRLIGEIPMGLSACSALTELTLERNSFNGSIPSFLGSLLSLEILDLSLNNFSSTIPHELVNLTLLNILNLSFNNLSGEVPVEGVFKKITAISLTRNKHLCGGIPQLNLPPCPVLPSQKKHKRSIKRRAIILIVAFGGVLISFITFISIYLLKKKAKKLSSTSLALQYGYVKVSYGELHQATNGFSSSNLAGKGNFRTVHRGTLVYFERPVAAKVLNLQTHGASKSFVAECNALGKIKHRNLVSILTCCSSVDYKGNDFKAIVFEFMSNGSLETLLHNNVEDSESTNLSLNLIQRVNIVLDVAFALDYLHSDSWEAVVHCDIKPSNILLDDDMVAHLENFGLARLIHGPASRSSSGQSSSSAIKGTIGYIPPEYGGGGSVSREGDMYSYGILLLEMLTGKRTTDSMFGEGLNLHSFCNMAMAEGIIEIVDSRLLIPIDEQDQGRRVITRQQNMEDTVRECLVLFARIGITCSKNLPLGEWA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90764g00011 604 FunFam LRR receptor-like serine/threonine-protein kinase EFR 278 389 - -
Stsc90764g00011 604 Gene3D Transferase(Phosphotransferase) domain 1 390 599 - -
Stsc90764g00011 604 ProSiteProfiles Protein kinase domain profile. 308 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90764g00011 604 Pfam Protein kinase domain 312 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90764g00011 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Stsc90764g00011 604 SMART serkin_6 308 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90764g00011 604 Gene3D Phosphorylase Kinase; domain 1 269 389 - -
Stsc90764g00011 604 SUPERFAMILY Protein kinase-like (PK-like) 288 529 IPR011009 -
Stsc90764g00011 604 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 82 - -
Stsc90764g00011 604 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 390 602 - -
Stsc90764g00011 604 PANTHER OS04G0122200 PROTEIN 2 564 - -
Stsc90764g00011 604 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 111 232 - -
Stsc90764g00011 604 Gene3D Ribonuclease Inhibitor 1 236 IPR032675 -
Stsc90764g00011 604 SUPERFAMILY L domain-like 3 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90764g00011 Stsc-Chr90764 61261 63394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90764g00011 1 604 Receptor kinase-like Gene Family AT3G47570 44.098 1.79e-162 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Stsc90764g00011 Pkinase 7.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90764g00011 - - ahf:112766919 853.973