Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90764g00007 ATGTCTTTCCTCATATTTCTCCTATCTTTCGCTTCACTAACCTTGGCTGTACGTGTATCCTTGAGTTCAGAGACCGATAAGATTGCATTGCTTTCTTTGAAGGACAAGCTTACCAATGGTGACCCTCATGCTCTGCCATCATGGAATCACTCTCTCCATTTCTGTCAATGGGAGGGCGTTACATGCTGTCGCCATTGCAAGAGAGTCTCATCCTTGCAACTTCAAAATCAATATTGGGGTGGTACACTTTCGCCATCCTTGGAAAATCTAACGTTCCTAAGGATGATCAATCTTACTAACATCTACTTGCATGGTGAGATTCCAAGAGAAGTTGGTCATTTAAAGAGGTTGCAGATTCTTGATTTGACGCAGAATAATCTTCATGGTCAAATTCCTTTGGAGATAATAAATTGTTCAAGCCTCCAGGTAATTATATTATTGTACAATAATCTAAGTGGCAAAGTTCCTTCATGGTTTGGTTCTATGAAGCAACTTACTCAACTAGTGCTTGGAGCCAACGGTTTTGTTGGCAGTATCCCATCTTCTTTGGGAAATCTTTCATCACTTGAGAAGTTGTCACTTGCATACAATCATTTGGAAGGACCCATAACTCCATCTTTGGGTAGGTTGTCAAATTTGAAATTTTTGTTTTTGGGGGTAAATAATTTGTCTGGCCAAGTCCCTCCTCCGCTTTATAACCTTTCAAATCTTCGATTTCTTTCACTCACGAAAAATCAGTTGGTGGGTACTGTTCTCTCGAATATACCAACGGCTTTTCCCTATCTTGAGGCTTTTCAGGGTGGAATGAACAGATTCACTGGTACTTTGCCATCTTCAATGTTCAACCTTTCTGAACTATACGAATTTGATATATCAGGAAATGGTTTTCATGGACCAATTTCTCCTGCTATAGGAAGTTTACACAAACTCCAGTCATTTGGGGCTGGACATAACAGATTCGGAAGTGGAAGAGCTGACGATTTGAATTTCCTTTCCTCGTTACAGAATTGCACTCAATTGAAAAGGCTTGGTCTTGATAGCAATTATTTAGGCGGTATATTGACAGATCTTATAGGCAACTTATCAAGCAATCTCGTTATGCTTTATATGGGGTCCAATCAAATATCTGGAAGGATACCTGATGGAATTGGAAAACTAATTAACTTACAATTACTTGGTATGGAGAATAATTTCCTTGAGGGAACAATTCCATATTCAATTGGAAAACTAAAGAATCTAGTATGGTTGACGTTGGGGAGAAATAAGTTGTTTGGCAACATTCCTCTTGTTATTGGTAACCTTACTATGTTGTCTGTAGTTGGTCTGGAGTCAAATAAATTTGAAGGATCCATTCCTTTTACACTTGCAAATTGCACCAAGATGGAGAAATTTTATGTTAATAATAACAGCTTAAGTGGTAATATACCCATTCAAACATTTGGCTACCAACAAGGTTTGATAGAGCTTTACCTATTTTCCAACTCCTTTACAGGCTCCATTCCTTCTGATCTTGGCAATTTGAACCATCTTTCCATCTTGTATTTACAAGAAAACAAGTTGAGTGGTGAGATTCCCATAGAACTTAGTGGTTGTTCTGCTCTATCAAAGCTCATGCTAGAAAGAAACTCATTCCATGGAAGTATACCTTCATTCTTAGGGTCTCTATTGTCCCTTGAAATCTTAGACCTTTCTCATAACAACTTCTCAAACACAATTCCGCATGAACTCATGAATCTCACGTTGCTGAGTACTTTGAACTTATCTTTCAACCATCTCTCTGGCGAAGTCCCCGTAGGAGGAGTATTTAAAAACATTACAGCAATATCACTCACTGGAAACAAACATCTTTGTGGTGGGATACCTCAACTGAATCTTCCTCCATGTCCTGTGTTGCCTTTACAGAAGAAACACAAGAGATCTATTAAGAAGAGAGTCATCCTCGCCATTGCATTGGGAGGTATACTAATCACTTTTGTAACTTTTATCAGTATATATCTTCTCAAGAAGAAGGCAAAAAAGTTATCCATTAAATCGTTAGCTTTGCAATATGGCTATGTGAAGGTTTCCTATGGAGAGCTACATCAAGCAACCAATGGATTTTCTTCATCCAATTTAGTTGGCACAGGAAACTTTGGTACTGTTTATAGAGGAGACCTTGTTCATTTTGAGAGACCTGTAGCTGTGAAGGTGTTGAATCTTCAAAGACGTGGGGCATCAAAGAGTTTCGTGGCCGAATGCAAAGCTCTAGGAAAAATCAAGCACAGAAACCTTCTCAGCATACTGACTTGTTGTTCAAGTGTTGATTACGAAGGGAATGATTTCAAGGCCATAGTGTTCGAGTTCATGTCTAATGGGAGTCTTGAAACCTTGTTGCACACCAATACTGAAGATAGCGAGTTCACAAATCTGAGTCTCAACCTTATGCAAAGGGTAAATATTGCTCTTGATGTGGCTTTTGCATTGGATTATCTTCACAATGATTCATGGGAAGCTGTAATTCATTGTGATATTAAGCCAAGCAATGTTCTACTTGATGATGACATGGTTGCCCACTTGGGAGACTTTGGATTAGCTAGATTCATTCATGATACCACAAGCCATTCTAGCAGTAATCAAGCAAGCTCTTCTGTAGTTAAGGGAACCATTGGATATATTCCACCAGAGTATGGAGCAGGCAGCTCAGTGTCACGAGAGGGAGACATGTATAGCTATGGAATTCTTCTTCTAGAGATGATCACCGGAAAGAAGCCAACTGATAGTATGTTTGGTGAAGGCCTAAGCCTACACATATTCTGTAACATGGCAATTCCAAAAAGAATCAGTGAGATTGTTGATTCGAGATTGCTATTTCCATGGCCAATTGAAGAAAAAGAAAAAAGGAGGGCCACAAGACAGCCAAAGATGGAAGAGAACTTGAGTGAGGAATGTGTAGCATCCTTTGCTAGGATTGGAGTTGCATGTTCTCAAGAGATTCCTAATGAGCGGATGAGCATAAAAGATGTCATAACCGAATTGTATGCAATTAAACAGAAGCTATCCTGCTAA 3045 0.3915 MSFLIFLLSFASLTLAVRVSLSSETDKIALLSLKDKLTNGDPHALPSWNHSLHFCQWEGVTCCRHCKRVSSLQLQNQYWGGTLSPSLENLTFLRMINLTNIYLHGEIPREVGHLKRLQILDLTQNNLHGQIPLEIINCSSLQVIILLYNNLSGKVPSWFGSMKQLTQLVLGANGFVGSIPSSLGNLSSLEKLSLAYNHLEGPITPSLGRLSNLKFLFLGVNNLSGQVPPPLYNLSNLRFLSLTKNQLVGTVLSNIPTAFPYLEAFQGGMNRFTGTLPSSMFNLSELYEFDISGNGFHGPISPAIGSLHKLQSFGAGHNRFGSGRADDLNFLSSLQNCTQLKRLGLDSNYLGGILTDLIGNLSSNLVMLYMGSNQISGRIPDGIGKLINLQLLGMENNFLEGTIPYSIGKLKNLVWLTLGRNKLFGNIPLVIGNLTMLSVVGLESNKFEGSIPFTLANCTKMEKFYVNNNSLSGNIPIQTFGYQQGLIELYLFSNSFTGSIPSDLGNLNHLSILYLQENKLSGEIPIELSGCSALSKLMLERNSFHGSIPSFLGSLLSLEILDLSHNNFSNTIPHELMNLTLLSTLNLSFNHLSGEVPVGGVFKNITAISLTGNKHLCGGIPQLNLPPCPVLPLQKKHKRSIKKRVILAIALGGILITFVTFISIYLLKKKAKKLSIKSLALQYGYVKVSYGELHQATNGFSSSNLVGTGNFGTVYRGDLVHFERPVAVKVLNLQRRGASKSFVAECKALGKIKHRNLLSILTCCSSVDYEGNDFKAIVFEFMSNGSLETLLHTNTEDSEFTNLSLNLMQRVNIALDVAFALDYLHNDSWEAVIHCDIKPSNVLLDDDMVAHLGDFGLARFIHDTTSHSSSNQASSSVVKGTIGYIPPEYGAGSSVSREGDMYSYGILLLEMITGKKPTDSMFGEGLSLHIFCNMAIPKRISEIVDSRLLFPWPIEEKEKRRATRQPKMEENLSEECVASFARIGVACSQEIPNERMSIKDVITELYAIKQKLSC 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90764g00007 1014 Gene3D Ribonuclease Inhibitor 328 629 IPR032675 -
Stsc90764g00007 1014 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Stsc90764g00007 1014 ProSiteProfiles Leucine-rich repeat profile. 557 580 IPR001611 GO:0005515
Stsc90764g00007 1014 SUPERFAMILY Protein kinase-like (PK-like) 682 1007 IPR011009 -
Stsc90764g00007 1014 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 782 1014 - -
Stsc90764g00007 1014 Pfam Protein kinase domain 702 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90764g00007 1014 Gene3D Transferase(Phosphotransferase) domain 1 782 1013 - -
Stsc90764g00007 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 331 633 - -
Stsc90764g00007 1014 SUPERFAMILY L domain-like 363 618 - -
Stsc90764g00007 1014 SMART serkin_6 700 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90764g00007 1014 Gene3D Ribonuclease Inhibitor 22 172 IPR032675 -
Stsc90764g00007 1014 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 63 330 - -
Stsc90764g00007 1014 Gene3D Ribonuclease Inhibitor 173 263 IPR032675 -
Stsc90764g00007 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Stsc90764g00007 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 670 781 - -
Stsc90764g00007 1014 SMART LRR_typ_2 186 210 IPR003591 -
Stsc90764g00007 1014 SMART LRR_typ_2 579 604 IPR003591 -
Stsc90764g00007 1014 SMART LRR_typ_2 507 531 IPR003591 -
Stsc90764g00007 1014 SMART LRR_typ_2 555 578 IPR003591 -
Stsc90764g00007 1014 SMART LRR_typ_2 410 434 IPR003591 -
Stsc90764g00007 1014 SMART LRR_typ_2 114 138 IPR003591 -
Stsc90764g00007 1014 SMART LRR_typ_2 234 261 IPR003591 -
Stsc90764g00007 1014 SMART LRR_sd22_2 362 391 - -
Stsc90764g00007 1014 SMART LRR_sd22_2 114 135 - -
Stsc90764g00007 1014 SMART LRR_sd22_2 507 530 - -
Stsc90764g00007 1014 SMART LRR_sd22_2 234 257 - -
Stsc90764g00007 1014 Gene3D Ribonuclease Inhibitor 264 327 IPR032675 -
Stsc90764g00007 1014 Gene3D Phosphorylase Kinase; domain 1 662 781 - -
Stsc90764g00007 1014 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
Stsc90764g00007 1014 Pfam Leucine rich repeat 533 592 IPR001611 GO:0005515
Stsc90764g00007 1014 ProSitePatterns Protein kinases ATP-binding region signature. 706 729 IPR017441 GO:0005524
Stsc90764g00007 1014 PANTHER OS04G0122200 PROTEIN 99 207 - -
Stsc90764g00007 1014 ProSiteProfiles Protein kinase domain profile. 700 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90764g00007 1014 SUPERFAMILY L domain-like 23 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90764g00007 Stsc-Chr90764 42634 45986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90764g00007 22 1011 Receptor kinase-like Gene Family AT3G47570 43.912 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Stsc90764g00007 Pkinase 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90764g00007 - - ahf:112766919 1437.17