Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90761g00007 ATGGAAAACATTTGTTCAATTATGTACAAGGAAGAGGTTGAGATGGATTTGCCACCGGGGTTCAGGTTTCACCCAACTGATGAGGAGCTTATAAGTCATTACCTTTACAACAAGGTGATTGACACCAACTTTTCAGCCAGAGCCATTGGTGAGGTGGACTTGAATAGGTGTGAGCCTTGGGATTTGCCATGGAAGGCGAAGATGGGTGAAAAAGAGTGGTACTTCTTCTGTGTAAGGGACAGAAAATACCCAACAGGATTGAGGACAAATAGAGCAACAGAAGCTGGGTATTGGAAGGCTACAGGGAAAGACAAGGAGATACACAGAGGCAAATCACTTGTTGGGATGAAGAAGACACTTGTCTTCTACAAAGGTAGAGCTCCCAAAGGACACAAATCTGATTGGGTCATGCATGAGTTCAGGCTTGATGGTCAATTCAATCCACACAACCTCCCCAAATCTGCAAAGAACGAGTGGGTGATTTGCAGGGTTTTTCACAAGAGTTCATCCGGTAAGAAAATCCATATTTCTGGGATAATGAGGTTGGACTCTTATGGCAACCAACAACCAACACCATTGCCAGATTGCTCACCTTGCAACACTTACGTGCCCTGCTTCTCCAATCCAATTATTGATCCTTTTGCTCTTGCTGTTAATGCTCCTTCCAATTCATGGACGGCCATGCAACCAGTTCAAGAAGCACCAAATTCCACATATTCCTGTTCTCATCATCAGAGTCAGGAGCATTCAATCCTTAGAGCCTTGCTTGAAAACAATTCTGGTTTCAAAGCTGCAGAGAGGGAAATGCCACTTACTGCCTCTCTTGAAACTGAAACATCCCCGCACGACCTTGCTACCCTCTGGAATTACCAGGTCCAGATCAAGTAG 888 0.4471 MENICSIMYKEEVEMDLPPGFRFHPTDEELISHYLYNKVIDTNFSARAIGEVDLNRCEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIHRGKSLVGMKKTLVFYKGRAPKGHKSDWVMHEFRLDGQFNPHNLPKSAKNEWVICRVFHKSSSGKKIHISGIMRLDSYGNQQPTPLPDCSPCNTYVPCFSNPIIDPFALAVNAPSNSWTAMQPVQEAPNSTYSCSHHQSQEHSILRALLENNSGFKAAEREMPLTASLETETSPHDLATLWNYQVQIK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90761g00007 295 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Stsc90761g00007 295 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Stsc90761g00007 295 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
Stsc90761g00007 295 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 245 - -
Stsc90761g00007 295 SUPERFAMILY NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Stsc90761g00007 295 FunFam NAC domain-containing protein 100-like 26 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90761g00007 Stsc-Chr90761 27980 29493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90761g00007 15 290 NAC Transcription Factor Family AT5G07680 60.135 9.48e-119 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc90761g00007 NAM 2.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90761g00007 - - ahf:112708225 427.172