Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90761g00003 ATGGCGACTGTAACAACACAGGCTTCAGCCACTGTTTTCAGGCCATGCCCTTCTTCCAAGACAAGGTTCCTCTCTGGCTCTTCCGCTGGCAGACTCAACAGGGAAGTGTCTTTTAAGGCTCCTTCTTCGTATGCCTCATTCAAGGTGGAAGCCAAGAAAGGAGAGTGGCTGCCTGGCTTGGCCTCCCCGACTTATCTGAATGGAAGTCTTCCGGGAGACAATGGATTCGATCCACTGGGGCTAGCAGAGGACCCGGAGAACTTGAAGTGGTTCGTACAGGCAGAGCTGGTGAATGGTAGATGGGCGATGCTGGGGGTGGCAGGGATGCTGCTGCCGGAGGTGTTCACGAACATAGGGATCATAAATGTTCCAAAATGGTACGACGCAGGCAAGGAAGAGTACTTCGCATCATCCTCAACCCTCTTTGTGATTGAGTTCATACTCTTCCATTACGTTGAGATCAGGAGATGGCAGGACATCAAGAACCCTGGAAGTGTGAACCAAGACCCCATCTTCAAGCAGTACAGCCTCCCACCAAACGAGGTCGGCTACCCTGGTGGCATCTTCAACCCCCTCAACTTCGCCCCGACTCTCGAGGCCAAGGAGAAGGAGCTTGCGAATGGCCGTTTGGCTATGCTCGCATTCTTGGGTTTTGTTGTTCAGCACAACGTCACTGGCAAAGGCCCCTTTGACAACCTCTTGCAGCACATCTCTGACCCTTGGCACAACACCATTGTCCAAACACTCTCTTCTAATTAA 759 0.5231 MATVTTQASATVFRPCPSSKTRFLSGSSAGRLNREVSFKAPSSYASFKVEAKKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFDNLLQHISDPWHNTIVQTLSSN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90761g00003 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Stsc90761g00003 252 SUPERFAMILY Chlorophyll a-b binding protein 53 250 - -
Stsc90761g00003 252 FunFam Chlorophyll a-b binding protein, chloroplastic 63 242 - -
Stsc90761g00003 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 20 248 IPR001344 GO:0009765|GO:0016020
Stsc90761g00003 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90761g00003 Stsc-Chr90761 12517 13781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90761g00003 42 250 Chloroplast and Mitochondria Gene Families AT3G61470 51.628 4.94e-75 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90761g00003 K08910 - rcu:8263414 470.314