Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90759g00002 ATGATGAGTAGTAGTCGAATTGTGTGGTCAGTCTCATTATTATTATTGAGTTTTCTATGTGTTTATCCATTTCATTCTTCAGCACAGCTTAGTCCCAACCATTATGCTAATATCTGCCCCAATGTTGAAGCCATCGTTAGACAAGCTGTTCAAAAGAAATTCCAGCAAACCTTTGTCACTGTTCCTGCCACCCTCCGTCTATTCTTCCATGACTGCTTTGTCCAGGGTTGCGATGGTTCAGTGTTGGTAGCATCAACAGGGGGAAACCAAGCAGAGAAGGATCATCCGGATAATTTGTCATTGGCTGGAGATGGATTCGACACAGTTATCAAAGCAAAAGCAGCTGTTGATGCTGTCCCTCAATGCAGAAACAAAGTCTCTTGTGCTGATATTCTTGCTTTGGCAACCCGTGATGTCATTGCTCTCGCCGGTGGACCTTCATACAAAGTTGAATTGGGAAGGTTTGATGGGTTAGTTTCAAGAGCTTCAGATGTAAATGGAAGGTTGCCACAACCTAACTTCAACTTGAATCAACTCAATTCTCTCTTTGCTGCAAATGGCCTCACCCAAACTGACATGATTGCCCTCTCAGGTGCACATACCCTTGGATTCTCACACTGCGGTAGGTTCTCAAACCGAATCTACAGCACTCCAGTGGACCCCACACTAAACAAGCAATATGCTACACAGCTTCAACAAATGTGCCCAAGAAACGTGGATCCAAGAATAGCCATCAACATGGACCCGAACACACCTCGCATCTTTGACAACGTTTACTACAAGAACCTTCAGAATGGGCAGGGTCTCTTTACCTCTGATCAGATCCTCTTCACCGATCAAAGGTCTAGAGCCACCGTTAATTCTTTTGCCTCTAATGCTAATGTCTTCAACTCCAACTTTGTTAATGCAATCACCAAGTTGGGTCGGGTTGGGGTTAAGACTGCCCGCAACGGAAAAATCCGTTCAGATTGTTCCGTTCTTTAA 984 0.4441 MMSSSRIVWSVSLLLLSFLCVYPFHSSAQLSPNHYANICPNVEAIVRQAVQKKFQQTFVTVPATLRLFFHDCFVQGCDGSVLVASTGGNQAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATRDVIALAGGPSYKVELGRFDGLVSRASDVNGRLPQPNFNLNQLNSLFAANGLTQTDMIALSGAHTLGFSHCGRFSNRIYSTPVDPTLNKQYATQLQQMCPRNVDPRIAINMDPNTPRIFDNVYYKNLQNGQGLFTSDQILFTDQRSRATVNSFASNANVFNSNFVNAITKLGRVGVKTARNGKIRSDCSVL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90759g00002 327 CDD secretory_peroxidase 29 326 IPR033905 GO:0004601|GO:0042744
Stsc90759g00002 327 PANTHER - 14 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Stsc90759g00002 327 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 Gene3D Peroxidase, domain 2 170 307 - -
Stsc90759g00002 327 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 Pfam Peroxidase 46 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 Gene3D - 33 326 - -
Stsc90759g00002 327 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Stsc90759g00002 327 ProSiteProfiles Plant heme peroxidase family profile. 29 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90759g00002 327 FunFam Peroxidase 33 179 - -
Stsc90759g00002 327 FunFam Peroxidase 170 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90759g00002 Stsc-Chr90759 28156 33661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90759g00002 2 324 Peroxidase AT5G67400 66.667 2.52e-161 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90759g00002 K00430 - gmx:100817540 528.865