Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90758g00014 ATGGCGTTGTCCCCTGAGTATGGATGGGATTACGACGTGTTTCTTAGCTTCCGAGGCACTGACACTGGAAAGGGCTTCGCTGGAAATCTATATTATGCTCTCAAACAGAGAGGAATCCGCACTTTCTTCGCTGACAGAGAGCTCGAGACAGGAGATAAGCTTACACAAACACTCCTCAAGAAAATTCAAGATTCCAAAATCGCCATCCCTGTGTTCTCTCCAGAATATGCTGATTCCGCATGGTGCCTACTAGAACTTGCAGAGATCATGGATAACATGGAGGAGAAGGGCCAATTGGGTTTTGCGGTGTTCCACGGTGTGTCTGCTTCTGAGGTTCGACGTCAGAAAGCTAAGAAGGGAGAAAAAGGAACTTATGAAGAAGCAATGGCTAAGCATGAGAGTAGGTACGATGCACAGACCGTGATGAAATGGAGAAAAGCTCTTGAGAAAGCGGCGGACTTGTCCAGCATGAGCTTCAAATCTAAGTATGATTATGAATATGAGTTCGTTGTAAAGATCATTAAAGAGGTGTCCAAAAAACTCCTGCGTCGTACTCTTGTGGGCTTTGCAAATCAACCATTTGGATTAGAGTCTGGGGTGCAAGAAGTATGCGAGCTTTTGGAAGTAGGAGCAGGATGTGATAACAAGAAAGTAGTCCGCATGGTAGGAATTCATGGAATGGGCGGGATAGGTAAATCCACTCTTGCTAAAGCTGTTTATAATTATATAGCTGACCAGTTTGACAATCGATGCTTTCTTGAAAACGTGAGTGAAAATTCAAGTAAGCATGGATTGGAACGTCAACAAGAGACGCTTCTTTCTAAAATTGTTGGGGAGTTGGATGCCAAATTAGGAGGCACCAGTGAAGGTATGGAACTAATAAAGCGTAGGCTTAAAAAGAAGAAGGTTCTGTTGATTCTTGATGATGTCGACGATAAAAAGCAGATGGAAGCACTTGCTGGAGGGCTAGATTGGTTTGGTTCTGGTAGCAGAGTTATTATTACCACCCGAGACAAAAAAATAATACTAAAATGTAAATGGATTGAAGGAAAGTACGAGTTAAAGGGGTTAAGTTGGGAGGATTCCCGTAAATTGTTTGAGTGGATGGCTCTTGGAAATAATAAGAAAGTTGATCAGCGTCTTATAAATCGTGCAATAACTTATTGTGCAAATCTTCCATTGGCTTTGGTGTCAATAAGTTCTGAGTTAAGTGATAGAAATGTAGAAGAATGGGAATGTATATTAGACTATTATGAAAGAAGTCTCGACAAAGGAATCTATGATGAACTTAGAAGAAGCTATGATCCTTTGGCAAAAGAAGTGCGAGACGTCTTTCTTGACATTGCTTGTTGCTTTAGAGTGTTCAGTTTGACAGAGGTCACTGAAGTGCTACGCGCTCATCATGGTTTCTGCCCGGAGCCTCATATCAAAATCTTGGAAGAAAAATCTCTCATAATCATTGAAAATAATCGGGTCAGATTACATACCTTAATACATCAAATGAGCAGAAAACTTGACCATGGATACCGCTTTTGCTTACGCTCCCATGAAGATATAGATCGACTTTTTGAAGACCATAAGGAGTACAGGCATATGAAAGTTTTGAATTTTGATTGTGCTGAATCTGTAAGAGTAATACCTGATGTATCATCTATCCCAAGTTTAGAGGAATTATCATTTGCAAAATGTAGGAATTTGATTGAAGTTGATAATTCAGTTGGAAAGCTGAGAAAGCTTAAGATATTGGACGCCTCTGGTTGTAGCAAGCTTAGAAGCTTCCCATCTCTTATGTTGCCATGTCTTGAAAAACTCAATCTCTCATCATGCTCTAGTCTTGAGAATTTTCCAAAAACACTAGAAAGGATGGGAGACTTAGTCAAGCTCGATTTAAGTTCCACTGCCATAAAAGCTATACCTGCTGCTCTCTTTTATGATGCCCCCAAATTACAAGAGTTATCCTTTGCAAATTGCCATGGTTTGAATGAACTTGATAATTCAGTTGGAAAACTGAGTTACCTTAAGATATTGGATGCCTCTGGCTGCAGCAATCTTAGAAGCTTCCCATCTCCTCTTAGGTTGCCATCTCTTGAAAAACTCGATCTCTCCTCATGCTCAAGTCTTGAGAGTTTTCCAGAAATACCAGCAAGAATGGAAAAAATAACACGGCTCAGATTGCAGAACTCTCCCATAAAAAAGTTGCCGAATTCAATTCGAAATCTTAGTCTGCTTCAAAGCTTGAAAATGCTTGGTGTTAATATCACATTTCTTCCTCAGTGCATCATAGAATGTCTTCTTTTGAAGAAATTGAATTTGGATCAGTGCCATGATCTTAAAGAAATTAGATGGCTTCCACCCAACTTGGAAACACTCTCTGTGACACGTTGTAGGTCCTTTGAATATTTGGACCTTACAATTCTTGGAAGAAATACCAAAGAATATTACAAGTTGAGGAGACTCGTTGTGGATAACTGTGGGAATCTTCAGAGAATCGAAGGAATTCTACCAGGAGCTTTCTCTGCAACAAATTGCATTTGCCTGCCTTCCTCCGTGCCACTGAATCAGGAACTACGCGAGGAAGGTGGAAGCATGTGGCATTTTGTGCCAGGAAACAGGATTCCAGAGTGGTTCCATCGTCGTAATAATGGAGATTCAATCTCTTTCTGGTTTCAAGAAAAGTTTCCTGCCATTTCACTTTGCGTTTTCCTTGGCGGGTTGGGTAAACAACAAATGCCATTTTATTTTTGTCTCAAATTGAAGATCAATGGCAATACCGTAAATAGGTGGCTGCTAGAGAACAAGAAGTATTGGTTTGTGCAAAAGCTAGAAGCTGATCATGTATTCTTTCTCCATGAAAAGCAAATGAAAGATGAAAATAGGCTGAATAAAGGACTTGTGGGAAATAAAGGATGGAATGGAGCAGAGATTTTTGTTGACGTTTATTTTCCAGATGGAGAGACAGAAATCGACATCCAAATTGGAATCCATATATTCAAAGGAAAAATTAGCATGAAGGACGTCCTATTCCCCAAGCCTTATCAAATCAAAGGAGATCATAATAATAGCATTGTGAGACTCACAAGAATCTAG 3087 0.4004 MALSPEYGWDYDVFLSFRGTDTGKGFAGNLYYALKQRGIRTFFADRELETGDKLTQTLLKKIQDSKIAIPVFSPEYADSAWCLLELAEIMDNMEEKGQLGFAVFHGVSASEVRRQKAKKGEKGTYEEAMAKHESRYDAQTVMKWRKALEKAADLSSMSFKSKYDYEYEFVVKIIKEVSKKLLRRTLVGFANQPFGLESGVQEVCELLEVGAGCDNKKVVRMVGIHGMGGIGKSTLAKAVYNYIADQFDNRCFLENVSENSSKHGLERQQETLLSKIVGELDAKLGGTSEGMELIKRRLKKKKVLLILDDVDDKKQMEALAGGLDWFGSGSRVIITTRDKKIILKCKWIEGKYELKGLSWEDSRKLFEWMALGNNKKVDQRLINRAITYCANLPLALVSISSELSDRNVEEWECILDYYERSLDKGIYDELRRSYDPLAKEVRDVFLDIACCFRVFSLTEVTEVLRAHHGFCPEPHIKILEEKSLIIIENNRVRLHTLIHQMSRKLDHGYRFCLRSHEDIDRLFEDHKEYRHMKVLNFDCAESVRVIPDVSSIPSLEELSFAKCRNLIEVDNSVGKLRKLKILDASGCSKLRSFPSLMLPCLEKLNLSSCSSLENFPKTLERMGDLVKLDLSSTAIKAIPAALFYDAPKLQELSFANCHGLNELDNSVGKLSYLKILDASGCSNLRSFPSPLRLPSLEKLDLSSCSSLESFPEIPARMEKITRLRLQNSPIKKLPNSIRNLSLLQSLKMLGVNITFLPQCIIECLLLKKLNLDQCHDLKEIRWLPPNLETLSVTRCRSFEYLDLTILGRNTKEYYKLRRLVVDNCGNLQRIEGILPGAFSATNCICLPSSVPLNQELREEGGSMWHFVPGNRIPEWFHRRNNGDSISFWFQEKFPAISLCVFLGGLGKQQMPFYFCLKLKINGNTVNRWLLENKKYWFVQKLEADHVFFLHEKQMKDENRLNKGLVGNKGWNGAEIFVDVYFPDGETEIDIQIGIHIFKGKISMKDVLFPKPYQIKGDHNNSIVRLTRI 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90758g00014 1028 Gene3D - 356 438 IPR042197 -
Stsc90758g00014 1028 PRINTS Disease resistance protein signature 221 236 - -
Stsc90758g00014 1028 PRINTS Disease resistance protein signature 691 707 - -
Stsc90758g00014 1028 PRINTS Disease resistance protein signature 389 403 - -
Stsc90758g00014 1028 PRINTS Disease resistance protein signature 297 311 - -
Stsc90758g00014 1028 ProSiteProfiles TIR domain profile. 9 181 IPR000157 GO:0007165
Stsc90758g00014 1028 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 614 794 IPR044974 GO:0006952
Stsc90758g00014 1028 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 155 IPR035897 -
Stsc90758g00014 1028 Pfam NB-ARC domain 220 424 IPR002182 GO:0043531
Stsc90758g00014 1028 SMART till_3 10 154 IPR000157 GO:0007165
Stsc90758g00014 1028 Gene3D - 178 349 IPR027417 -
Stsc90758g00014 1028 Pfam TIR domain 11 181 IPR000157 GO:0007165
Stsc90758g00014 1028 Gene3D Ribonuclease Inhibitor 718 845 IPR032675 -
Stsc90758g00014 1028 Gene3D Ribonuclease Inhibitor 515 717 IPR032675 -
Stsc90758g00014 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 448 IPR027417 -
Stsc90758g00014 1028 SUPERFAMILY L domain-like 493 830 - -
Stsc90758g00014 1028 Gene3D - 7 177 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90758g00014 Stsc-Chr90758 56494 63686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90758g00014 219 848 WRKY Transcription Factor Family AT5G45050 29.706 2.54e-51 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90758g00014 - - ahf:112751548 733.406