Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90758g00007 ATGTCAACACCACCACTCACCTCTTCCTCTTCCTTTTGCTATGCATTCACCTATGATGTGTTTATCAGCTTTAGAGGCTGTGATACTCGCTATGGTTTCACTAACAATCTCTACCAAGCTCTCCATAGAAAAGGAATCCGCACCTTCTTTGATGATGAGGAGCTTCGGAAAGGAGAGGGAATCGCACAATCACTTGTCAAGGCAATTGAAGAATCCAGAATTGCCATTTTAGTGTTTTCCAAGAACTATGCATCATCTTCCTTTTGCTTAGATGAACTTGTCAAGATTATGGAGTGCATTAAGGGGAACGGCCGGTTGATTTTTCCGGTCTTTTATGATGTTGATCCCAGTGATGTGCGACACCAAAAAGGAAGCTATGCAGTTGCGTTGACTAATCATGAGCAGAGGTTCAAGGATGATAACGTGAAAGTGCAGAAATGGAGGACAGCACTGCATGAAGCGGCTAACCTGTCCGGCAATGATTTCAAACTTCAAAGGGAATATGAGCATGCTTTTATAGTGAATATTGTGAAGGAGATCTCAAATAGGATCCGTCGTGCACCTTTACATGTTGCTGATTATCCTGTTGGACTGGAATCTCGAGTACGGGAAGTAAACAAGCTTCTAAATGGTGGATCCAATAATGGAGCCCTTATGGTAGGGATATATGGAGTTGGTGGAATAGGTAAAACAACACTTGCTAAAGAAGTTTATAACTTGATTGCTGACCCGTTTCATGGTTTATGTTTTCTTGAAAATGTGAGGGAAAATTCAATTAAACATGGTTTAGCATATCTCCAGGAGAGTTTTCTTTGTAAAATACTTGGAGAGAAAGATATAAAGCTAGCAAGTGTAAGTGAAGGAATTTCATTAATAAAGAAAAGGTTTAAGAACAAGAAGGTTCTGTTGGTTCTTGATGACATCGACAAACCAGAGCAATTGCAGGCAATTGCTGGAAGTCCCGATTGGTTTGGTCCTGGCAGCATAATCATTATAACAACTCGGGACAAACATTTATTGACGAGTCATAGGGTGGAGAGAACATACCAAGTGAAGGGATTTGATGAGAAAGAAGCACTTGAATTGCTTAGTTGGAGTGCTTTCAAATATGAAAATGTTGATCCCATTTATATGGACATTTTGAATAAAGTAGTGTTGTATGCTTCTGGACTTCCATTGGCTCTGGAGGTAATAGGTTCAAATTTGAATGGAAGAAGTGTAGAGGAATGGATATCTGCATTAGATGAGAATAAAAGAATTCCTAATAAAGATATCCAAAGGATTCTTAGAGTAAGTTTTGATGCTTTGGAGGACTATCATCAGACACTTTTCCTAGACATTGCTTGTTGCTTCAAAGGATATGATTTTGAAGATCTTAAAGATACACTTCATGCTCTTCACGATGTTAACCCGATATTTGGTATCCGTGTGTTGGCTGAAAGATCTCTAATAAAGATTTATAAGAATGGCTATGTGACACAGCATGACTTGATTCAAGATATGGGCAGAGAAATTGTTCGGCAAGAATCACCAGAAAATCCTTCTGGACGTAGTCGGTTATGGCTTCCCGAAGATGTCATGCAAGTTTTACAACAGAACATTGGAACCAATCAAATCGGGCTCATGTTTCTGGATGCTCCCATGTCTAAAGTAATAGATTGGGATGGAGAGGGCTTCAGAAAGATGGGAAACCTCAAAGCACTTATTATTAAAAATGGCAATTTTTTCAATGGTCCTCATCATCTTCCAAACAGTTTGAGAGTGTTGGAATGGTGTGGATATCCTTCACATTCTTTACCAGCTGATTTTCATCCAAAGAAGCTTTCCATACTCAAGTTGCCCAACAATTGCTTTACACCACTCCCGTTAGTTAAGCTGTTAAAGGAGTTTATGGACATGAGTGTTTTGGATTTTAGTAGCAATGATTGGATAACACATATACCCGATGTTTCAAGTGCCCCAAATTTAAAAGAATTACGCTTTGGATTTTGTGAGAATTTAGTTGAAATTGATGGGACGGTTGGATTATTGAGTAAACTTAGAATGTTGAATGTTTATCGTTGTACAAAGCTTAGGAGTCTTCCTTCCCTTATGTTACCCTCTCTTTTGTTCCTCGATCTTACAGAATGTCCTAGTCTTGAGAGTTTTCCTGAAATATTGGGGAAAATGGAAAATATGACATCTCTTGAATTGTTTAATACTTCCATAAGAGAATTGCCATATTCCATTTGTAATCTTACTCGGCTTCAACACGTGAGTCTGCAATGGAGTGAAACTATTATATTACCAAGTAGCATTTTCATGTTGCAAGAACTCAGGAATTTGCATATTGTGAGATCTAAGGTGCTATTATCTAATGAAGAAGAAGGTACAGAGGAAAGGTGCTCAGTATCGTGTGCAGCCATGACATATCTTAAATTGTATTCATCCAATATGTCTGATAAATTCCTCAGAATAATTCTTGCTCGGTTTCCCAATTTGGAACGCTTAAATTTGACAGAAAGTAATCTCAGAATTCTTCCAGCATGCATAAAAAATTGTCACCTTCTGAGGTTTCTTCGTCTTGATCACTGCATCAATCTTCAAGAAATTAGAGGAATTCCACCCAACATACAGTGTTTGAGTGCATCTTACACCATGTCGTTGAGTTCTTCGAGTAGAAGGATATTATTGAATAAGGAACTGCATGAAGAGGTTGGAAAAAAGAGATTTGTTTTGCCAGGAACCAGTATTCCAAGTTGGTTTGAGAATCAGGACAGTGGACAACCAATTTCTTTCTGGTTTCGTAATCAGTTTCCCGCCATATCTCTCTGTTTTCTTTTAAAGGAGTTAGACAATGAACGTAATATTCGTCCTCATATGGAATTGATCAGCAATGGCAATCACAATGGCCGGCATGTATTTGATGATAGAAGTTGCATGGGTGCTCCTGGTCATATATGGATTTATGATTTAGAAGATAATGCGGGTCAACAGTTTCAACAAAATGAATGGAATCAAGCGTTGGTCTCTCTTTCAGTAGTTACTTTTGGAGACAAGAAGAACGTCAGAGAACTGAGTACAAAGGAGTGGGGGAGCATAGAAATTGGAGTGCATATAATCAAAGAAAGAAGTAACATGGATGATATCCAGTTCACTAATCCACTTTTGGACAAAGATGATAATAAAACACTGCACGTGGCAGATCCTCACAATCACCATGTGCATCAGCAACCAGGCAGACAGCTGGGATTATCACTTCCACCTCCATCGTTGAGCAATAATTTGCAATGGGACCCATATTACGACTGTATTCGAGCTACAGAAATAGCTCCAGGTGAATCTTCTAATACACCATCTTCTGGCAATGCAAGAGAAGAAGAAGTACATCCAATATCCACTTGCACTGCATCGTCGACCTCCTCATCAATCCATAAATATTTGAGCAATGAAAACGAAACAACTACTGTTGACGAAGATGAAGATGATGATGATGTAGAAATGGATGCATTTTTTGATTCTGTTGATGTTACTGGCATCCCTATGCTTTATAATTCCCATGAGAAGTTGGTTACCACTACTCCAAGTGATGAAGAAATCAGGCAAACATTGAGATCCGTAAAAAGCTTCCTCTCCCATGATGCTTCAATTTTATTGGATCCTGAATTGTGCACTATCTTGAAAGCCAACCTAGACTACCTCTCCAACTTATCTTCTGCAGATCATGGTGGGATATCAAGAGAAATGAGTAAAGTGATATCAGAAGCTTCACAGTTTTTGACTCGTTGGAGTAGGGACTACACTAAAGGTCATAACAAAATTGATTATATAATGTCTCAATTGCTGAGAGCTGATGAATTGGAAATGAATCTGGAAAGTAACAAGAAAAGGTATCTGGAAGTTGTGGCCTCTCGTAAGAGAAAAAGAGAGATTTTTGAGGAAGCAAAGACAATTAAAGCTGAATTGGATGAGTTAAGGAAGAATGTGCCAATGGGAACATGA 3981 0.3863 MSTPPLTSSSSFCYAFTYDVFISFRGCDTRYGFTNNLYQALHRKGIRTFFDDEELRKGEGIAQSLVKAIEESRIAILVFSKNYASSSFCLDELVKIMECIKGNGRLIFPVFYDVDPSDVRHQKGSYAVALTNHEQRFKDDNVKVQKWRTALHEAANLSGNDFKLQREYEHAFIVNIVKEISNRIRRAPLHVADYPVGLESRVREVNKLLNGGSNNGALMVGIYGVGGIGKTTLAKEVYNLIADPFHGLCFLENVRENSIKHGLAYLQESFLCKILGEKDIKLASVSEGISLIKKRFKNKKVLLVLDDIDKPEQLQAIAGSPDWFGPGSIIIITTRDKHLLTSHRVERTYQVKGFDEKEALELLSWSAFKYENVDPIYMDILNKVVLYASGLPLALEVIGSNLNGRSVEEWISALDENKRIPNKDIQRILRVSFDALEDYHQTLFLDIACCFKGYDFEDLKDTLHALHDVNPIFGIRVLAERSLIKIYKNGYVTQHDLIQDMGREIVRQESPENPSGRSRLWLPEDVMQVLQQNIGTNQIGLMFLDAPMSKVIDWDGEGFRKMGNLKALIIKNGNFFNGPHHLPNSLRVLEWCGYPSHSLPADFHPKKLSILKLPNNCFTPLPLVKLLKEFMDMSVLDFSSNDWITHIPDVSSAPNLKELRFGFCENLVEIDGTVGLLSKLRMLNVYRCTKLRSLPSLMLPSLLFLDLTECPSLESFPEILGKMENMTSLELFNTSIRELPYSICNLTRLQHVSLQWSETIILPSSIFMLQELRNLHIVRSKVLLSNEEEGTEERCSVSCAAMTYLKLYSSNMSDKFLRIILARFPNLERLNLTESNLRILPACIKNCHLLRFLRLDHCINLQEIRGIPPNIQCLSASYTMSLSSSSRRILLNKELHEEVGKKRFVLPGTSIPSWFENQDSGQPISFWFRNQFPAISLCFLLKELDNERNIRPHMELISNGNHNGRHVFDDRSCMGAPGHIWIYDLEDNAGQQFQQNEWNQALVSLSVVTFGDKKNVRELSTKEWGSIEIGVHIIKERSNMDDIQFTNPLLDKDDNKTLHVADPHNHHVHQQPGRQLGLSLPPPSLSNNLQWDPYYDCIRATEIAPGESSNTPSSGNAREEEVHPISTCTASSTSSSIHKYLSNENETTTVDEDEDDDDVEMDAFFDSVDVTGIPMLYNSHEKLVTTTPSDEEIRQTLRSVKSFLSHDASILLDPELCTILKANLDYLSNLSSADHGGISREMSKVISEASQFLTRWSRDYTKGHNKIDYIMSQLLRADELEMNLESNKKRYLEVVASRKRKREIFEEAKTIKAELDELRKNVPMGT 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90758g00007 1326 MobiDBLite consensus disorder prediction 1105 1130 - -
Stsc90758g00007 1326 Gene3D - 14 182 IPR035897 -
Stsc90758g00007 1326 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Stsc90758g00007 1326 Gene3D Ribonuclease Inhibitor 789 903 IPR032675 -
Stsc90758g00007 1326 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 758 IPR044974 GO:0006952
Stsc90758g00007 1326 SUPERFAMILY "Winged helix" DNA-binding domain 424 531 IPR036390 -
Stsc90758g00007 1326 Gene3D - 183 348 IPR027417 -
Stsc90758g00007 1326 Pfam NB-ARC domain 199 416 IPR002182 GO:0043531
Stsc90758g00007 1326 Gene3D - 354 437 IPR042197 -
Stsc90758g00007 1326 Coils Coil 1301 1321 - -
Stsc90758g00007 1326 SMART till_3 17 157 IPR000157 GO:0007165
Stsc90758g00007 1326 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 186 - -
Stsc90758g00007 1326 Pfam TIR domain 18 183 IPR000157 GO:0007165
Stsc90758g00007 1326 Gene3D Ribonuclease Inhibitor 530 788 IPR032675 -
Stsc90758g00007 1326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 447 IPR027417 -
Stsc90758g00007 1326 PRINTS Disease resistance protein signature 388 402 - -
Stsc90758g00007 1326 PRINTS Disease resistance protein signature 219 234 - -
Stsc90758g00007 1326 PRINTS Disease resistance protein signature 697 713 - -
Stsc90758g00007 1326 PRINTS Disease resistance protein signature 295 309 - -
Stsc90758g00007 1326 SUPERFAMILY L domain-like 537 886 - -
Stsc90758g00007 1326 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90758g00007 Stsc-Chr90758 18167 23708 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90758g00007 12 777 WRKY Transcription Factor Family AT4G12020 30.545 2.92e-78 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90758g00007 - - ahf:112801816 1741.47