Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90753g00006 ATGGCGGCATCATTGTTAGGAGGAGCTGCCATAGGAGCTGTGTTTGGAGAACTCCTGAAAGCAGTTATAGATATGAAAGACAGAGCAGTTATGTTCAAACCAACCTTAGCATACCTCACTACAACATTAATAGCAATAGAACCTGTGATTAAGGAGATGGAACAGCAGAACAACGAACTAGGTCGAGCGAAATCAGAGCTAGAGTTGTTGATGAAGGAAATGGAAGAAGGCACAAAGCTTGTTTACAAGTGTTGTAGAATCCACTATCTGAACTATCCTGCTAGGATTCGGCACCAAGAACAATTGGGAGCATTGGTAGAGTCTCTGGTGAGGTTCTTCATCATTGATATGCAGGCTCAGACCGCAAGGGATTTGAAAGAGACGCTCTTGAAGGTTAGAAGAATACATAGCGCTGTTAATAAGATGCAACTCATGAATACCAATGATGAGAATGTAACGGAAATAACTGATTCTGTTCCGGAAATCGCGGTCGAATCGGAGACTATTGGGAATGATTCTGGTGAGCAAGTCATGGAAGATGGCACTAGAGTCTCACACACTGCTAGCCAAACTAAAGAAAAAGCAAATGATTGTGAAGAAGAAAAGCATTTGACGACTGTCAAATCCCATGATCAATCATACATAGATCGGAAGAGATTCATGGGTATATGTCTTCCTATACCACCAATTCTACATAAGATAAGTGGTGGATTTAACCTCTTAGGACCACCCTCTGTTCATTCCATACCACGTAATAGAATCATTATTTATGAAGGGTATCCTTATAAACTTGATCTTGAGGATTTGTTGAGAGCTTCAGTGGAAGTTCTTGAAGAAACAAGTTATGCAACTACCTACAAAGTCCTCTTGAAGAATGGAACAACGTTAGTTATGAAGAAATTAAAAGATGTGATGGTAGAGAAGCAAGAATTTAAACACAAGATAGAGACTGTGCAAAGAATTTCTCAGCACCCAAATGTTCTGCCTCCTCTTGCCTGCTATTGTTCCAATGATGAAAACCTGCTGATTTATGATTACATGACACAAGGCAGCTTTTCCAAGCTATTGCATGGAGCAAACGAATCTGAATATCATACAGAGGCCCTACCACTAGATTGGGATTCAAGAATGAAGATTTCAGTTGGAGTTGCCAAGGGTATTGCTCACATCCACTCTCTGGAAGGAGGAACTTATGTCCATGGCAATATAAGATCATCCAATGTGCTTGTCACAAATGATCACCAAGGTTGCATATCAGACCTCTCTATGATTTATTCGCTAAGTAACTCCTTCAACCAATTTAGATACACAGGTTACCAAGAAGTGGATCACTTTTTCCGACCAAAGAAAATAGTGAAGCTGACCCAAAAACATGATGTGTATTGCTTTGGTGTTCTTCTTTTTGAGATGCTGAGTAGAAGTTTGCCACCAGCAAGAACTTACTCTGATGTTATTGATGGCATTCCTGTGTTCCTTGATGAAGAAATTAAGGGTAATAGAGATGCCTGGAAGATGATAAAATTGGCAGAGAAATGTACGTCACAAGAACCTAATGATAGACCATCCATGCATGAGGTTGTTAGGGAAATGGAAGAAATCTTAGTAAATCCAGTCAAGGTAAGCTGA 1626 0.4004 MAASLLGGAAIGAVFGELLKAVIDMKDRAVMFKPTLAYLTTTLIAIEPVIKEMEQQNNELGRAKSELELLMKEMEEGTKLVYKCCRIHYLNYPARIRHQEQLGALVESLVRFFIIDMQAQTARDLKETLLKVRRIHSAVNKMQLMNTNDENVTEITDSVPEIAVESETIGNDSGEQVMEDGTRVSHTASQTKEKANDCEEEKHLTTVKSHDQSYIDRKRFMGICLPIPPILHKISGGFNLLGPPSVHSIPRNRIIIYEGYPYKLDLEDLLRASVEVLEETSYATTYKVLLKNGTTLVMKKLKDVMVEKQEFKHKIETVQRISQHPNVLPPLACYCSNDENLLIYDYMTQGSFSKLLHGANESEYHTEALPLDWDSRMKISVGVAKGIAHIHSLEGGTYVHGNIRSSNVLVTNDHQGCISDLSMIYSLSNSFNQFRYTGYQEVDHFFRPKKIVKLTQKHDVYCFGVLLFEMLSRSLPPARTYSDVIDGIPVFLDEEIKGNRDAWKMIKLAEKCTSQEPNDRPSMHEVVREMEEILVNPVKVS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90753g00006 541 ProSiteProfiles Protein kinase domain profile. 271 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90753g00006 541 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 191 534 IPR046959 -
Stsc90753g00006 541 SUPERFAMILY Protein kinase-like (PK-like) 275 536 IPR011009 -
Stsc90753g00006 541 Coils Coil 50 77 - -
Stsc90753g00006 541 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Stsc90753g00006 541 Gene3D Transferase(Phosphotransferase) domain 1 264 537 - -
Stsc90753g00006 541 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 135 IPR008808 -
Stsc90753g00006 541 Pfam Protein tyrosine and serine/threonine kinase 288 529 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90753g00006 Stsc-Chr90753 34548 37976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90753g00006 251 533 Receptor kinase-like Gene Family AT3G08680 41.311 1.91e-66 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc90753g00006 PK_Tyr_Ser-Thr 1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90753g00006 - - ahf:112751694 675.626