Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90753g00005 ATGGCGGCATCATTGTTAGGAGGAGCTGCCATAGGAGCTGTGTTTGGAGAACTCCTGAAAGCAGTTATAGATATGAAAGACAGAGCAGTTATGTTCAAACCAACCTTAGCATACCTCACTACAACATTAATAGCAATAGAACCTGTGATTAAGGAGATGGAACAGCAGAACAACGAACTAGGTCGAGCGAAATCAGAGCTAGAGTTGTTGATGAAGGAAATGGAAGAAGGCACAAAGCTTGTTTACAAGTGTTGTAGAATCCACTATCTGAACTATCCTGCTAGGATTCGGCACCAAGAACAATTGGGAGCATTGGTAGAGTCTCTGGTGAGGTTCTTCATCATTGATATGCAGGCTCAGACCGCAAGGGATTTGAAAGAGACGCTCTTGAAGGTTAGAAGAATACATAGCGCTGTTAATAAGATGCAACTCATGAATACCAATGATGAGAATGTAACGGAAATAACTGATTCTGTTCCGGAAATCGCGGTCGAATCGGAGACTATTGGGAATGATTCTGGTGAGCAAGTCATGGAAGATGGCACTAGAGTCTCACACACTGCTAGCCAAACTAAAGAAAAAGCAAATGATTGTGAAGAAGAAAAGCATTTGACGACTGTCAAATCCCATGATCAATCATACATAGATCGGAAGAGATTCATGGGTATATGTCTTCCTATACCACCAATTCTACATAAGATAAGTGGTGGATTTAACCTCTTAGGACCACCCTCTGTTCATTCCATACCACGTAATAGAATCATTATTTATGAAGGGTATCCTTATAAACTTGATCTTGAGGATTTGTTGAGAGCTTCAGTGGAAGTTCTTGAAGAAACAAGTTATGCAACTACCTACAAAGTCCTCTTGAAGAATGGAACAACGTTAGTTATGAAGAAATTAAAAGATGTGATGGTAGAGAAGCAAGAATTTAAACACAAGATAGAGACTGTGCAAAGAATTTCTCAGCACCCAAATGTTCTGCCTCCTCTTGCCTGCTATTGTTCCAATGATGAAAACCTGCTGATTTATGATTACATGACACAAGGCAGCTTTTCCAAGCTATTGCATGGAACAACCCAAGATAGAAAGGCCCTACTAGATTGGAATTCAAGAATAATGAATATTTTACTCGGAGTTGCCAAGGGTCTTGCTCACATTCACTCTCTGGAAGGAGGAACTTATGTCCATGGCAATATAAGATCATCCAATGTTCTTGTCACAAATGATCATCAAGGTCGCATATCAGATCTCTCAATGACTTATTCACTAAGTAAGTCCTTCAACCAATTTAGGAAAACAGGTTACCAACAAAACGATGAACTTCTTCGACCAAAGAAAAAAGTGACCCAAGAATGTGATGTTTATAGCTTTGGTGTTCTTCTTTTTGAGATGCTAATAGGAAGATTGCCATCTGACCATAGTGATCTACCAATAGATTTTAGCGTTCGTTCTATGGAAGAAGGTATGTCTGAGAGTGCATTTAATATAAATAATAAAAGGTATTCCAGCAAGATGAGGCTATTGGCAGAAAAATGTAGGTCAGAAGTACCTGATAAAAGACCTTCCATGGCTGAGGTTGTTAGGGAAATGGAACAAATAAGTGCATCATATCATAGTCAATATCAATAA 1632 0.3909 MAASLLGGAAIGAVFGELLKAVIDMKDRAVMFKPTLAYLTTTLIAIEPVIKEMEQQNNELGRAKSELELLMKEMEEGTKLVYKCCRIHYLNYPARIRHQEQLGALVESLVRFFIIDMQAQTARDLKETLLKVRRIHSAVNKMQLMNTNDENVTEITDSVPEIAVESETIGNDSGEQVMEDGTRVSHTASQTKEKANDCEEEKHLTTVKSHDQSYIDRKRFMGICLPIPPILHKISGGFNLLGPPSVHSIPRNRIIIYEGYPYKLDLEDLLRASVEVLEETSYATTYKVLLKNGTTLVMKKLKDVMVEKQEFKHKIETVQRISQHPNVLPPLACYCSNDENLLIYDYMTQGSFSKLLHGTTQDRKALLDWNSRIMNILLGVAKGLAHIHSLEGGTYVHGNIRSSNVLVTNDHQGRISDLSMTYSLSKSFNQFRKTGYQQNDELLRPKKKVTQECDVYSFGVLLFEMLIGRLPSDHSDLPIDFSVRSMEEGMSESAFNINNKRYSSKMRLLAEKCRSEVPDKRPSMAEVVREMEQISASYHSQYQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90753g00005 543 ProSiteProfiles Protein kinase domain profile. 271 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90753g00005 543 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 191 536 IPR046959 -
Stsc90753g00005 543 Pfam Protein kinase domain 281 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90753g00005 543 Gene3D Transferase(Phosphotransferase) domain 1 347 543 - -
Stsc90753g00005 543 Coils Coil 50 77 - -
Stsc90753g00005 543 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Stsc90753g00005 543 Gene3D Phosphorylase Kinase; domain 1 251 346 - -
Stsc90753g00005 543 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 135 IPR008808 -
Stsc90753g00005 543 SUPERFAMILY Protein kinase-like (PK-like) 275 538 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90753g00005 Stsc-Chr90753 29369 37976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90753g00005 251 537 Receptor kinase-like Gene Family AT3G08680 43.189 5.85e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc90753g00005 Pkinase 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90753g00005 - - aip:107625870 682.945