Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90750g00013 | ATGATGGGTTCAGGTACCAATTTGGTTACCACGGTCATTGGCTTTGGGATGAGTGCCACTTTCATTGTTTTTGTGTGCACCAGAATCATTTGTGGAAGGATAAGAGGGAGTGTTGAATCTCGCATGATGTATGAGATTGAATCCAGGATTGACATAGAACAGCCAGAACATCATGGTAATGACGCCGAACCCGAGCCTGTTATGCTTGATGCCATCCCCACTTTGAAGTTCAATCAAGAGGCATTCAGTTCTATTGAAGACACACAGTGTGTCATATGTTTGGCAGATTACAGAGAAAGGGAAGTGTTGCGCATCATGCCGAAATGCGGTCACACGTTTCATCTTTCTTGCATTGACATATGGCTGAGGAAACAATCCACTTGCCCGGTATGCCGTCTGCCGTTGAAAAACTCGTCTGAGGCGAAACATGTTAGACCTGTTACATTTACCATGAGCCAGCCTCTTGACGAGTCGCACACAGCGGAAAGGAATCAAGATAGTGAGAGTCACGTCGAACCCACCTCTAGCAACTCCTCACAACCACCAACTCCTGGTGAACCAGAAGCAAGACAATGA | 576 | 0.4635 | MMGSGTNLVTTVIGFGMSATFIVFVCTRIICGRIRGSVESRMMYEIESRIDIEQPEHHGNDAEPEPVMLDAIPTLKFNQEAFSSIEDTQCVICLADYREREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSEAKHVRPVTFTMSQPLDESHTAERNQDSESHVEPTSSNSSQPPTPGEPEARQ | 191 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90750g00013 | 191 | MobiDBLite | consensus disorder prediction | 144 | 158 | - | - | |
Stsc90750g00013 | 191 | Pfam | Ring finger domain | 89 | 132 | IPR001841 | - | |
Stsc90750g00013 | 191 | PANTHER | OS11G0150450 PROTEIN | 1 | 175 | - | - | |
Stsc90750g00013 | 191 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 142 | IPR013083 | - | |
Stsc90750g00013 | 191 | MobiDBLite | consensus disorder prediction | 144 | 191 | - | - | |
Stsc90750g00013 | 191 | MobiDBLite | consensus disorder prediction | 170 | 185 | - | - | |
Stsc90750g00013 | 191 | SUPERFAMILY | RING/U-box | 80 | 138 | - | - | |
Stsc90750g00013 | 191 | ProSiteProfiles | Zinc finger RING-type profile. | 90 | 132 | IPR001841 | - | |
Stsc90750g00013 | 191 | SMART | ring_2 | 90 | 131 | IPR001841 | - | |
Stsc90750g00013 | 191 | CDD | RING-H2_EL5-like | 89 | 132 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90750g00013 | Stsc-Chr90750 | 93040 | 95147 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90750g00013 | 79 | 180 | C3H Transcription Factor Family | AT4G10160 | 38.462 | 8.55e-20 | 81.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90750g00013 | - | - | ccaj:109802319 | 343.199 |