Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90750g00008 ATGGCGACTCCAGAAGAGGCAAAGCTCGAAACTTTCCTCCACTGGCTACAGCCAAATGGGGTGGAGCTAAGAGGCTGCAAGATCAAGCACTGTGATTCCAGAAAAGGATTTGGCATATTTTCTGATAAAGATGTCTCTGATGGGATTTTGTTGGCTGTTCCGCTTGACCTAGCAATTACTCCCATGAGGGTTTTGCAAGATCCTCTTCTAGGGCCAGCATGTAGATCCATGTTTGAAGAAGGACATGTGGATGACAGGTTACTAATGATGCTCTTGCTGACTGTGGAGCGATTGCGCGAGAATTCTCTGTGGAAGCCGTACCTTGATATGCTCCCAACCACTTTTCACAATCCACTTTGGTTTAGTGATGATGAACTTCAAGCACTAAGAGGAACAACATTATACCGTGCAACTGAGTTGCAGAAGAAAAGCCTGATATCTTTATATGAAACTAAAGTGAAGGATTTGGTGAAGAAGCTTTTGACTCTTGATGGAGCTTCAGAGATTGAGGTGCGCTATGAAGATTTTCTTTGGGCCAATTCAGTATTCTGGAGCCGTGCTTTGAACATTCCGATGCCTCGTTCTTATGTATTTCCAGAAATGCAAGAAGGAGAAGCTCAAGAAAGGGATCAGGTTAAACAATCCGAAAATCGAACGAAGGAAATGATGTGTACTACAACGCAAGGAGACACTGTTTGGGTAGAGGGTCTTGTCCCTGGCATTGACTTTTGCAACCATGATCTGAAGCCGATAGCAACATGGGAAGTTGATGGAACTGGTTCAACAACAGGGGTTCCTTGCTGCATGTACCTTCAATCTGCTGCTCCAAGTCCCTTGCAGATTGATCAAGAAATTTCCATTAGTTATGGCAACAAAGGAAATGAGGAACTTCTATATCTGTATGGTTTTGTCATTGATGATAACACAGATGACTATCTCATGGTCCACTATCCAGCAGAAGCACTCAATACTATTTCTTTTTCAGAATCCAAAAGCCAGTTGCTTGAAGTGCAGAAGGCTGAAATGAGATGTCTTTTACCAAAAGCTTTGCTGGAACAAGGGTTTTTTCCGTTAGGCAAGCAAAATAAAGGAGAAAGTAACAATGGCAAGGTTGATCAAGTTCCCAACTATAGTTGGAGTGGTCAGCGCAAGACGCCATCTTATGTAAACAAGCTTGTTTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGATGAGCTTTACAAGGTTTCTTCAATGCTTGAAGAGCTTGTAGGACCTGAAGGGGGGAGAGAACTCTCTGATACAGATGTGCAAGCAGCAATATGGGAGGTTTGTGGTGATTCAGGAGCTTTCGAAATTCTTGTTGATCTTCTTCGTGTTAAGTTGATGGATCTTGAAGAAGGTTCTGGAACAGAAGAAAGTGACCTTGAGTTGCTCAAGAAGGCTCTTATTATTGATAGCCATGAAAATAACAAGCATCCAAGAATGGAAAATGAATCAGAAGAACACATGGCGATGAGTAGAAACAAGTGGTGTTCAATTGTATATAGGCGTGGCCAAAAGCAGCTAACAAGGTTATTCTTGAAAGAAGCAGAACATGCTCTCCATTTATCACAAAATGAACAAGAGTTTATTGTTCCTTAA 1641 0.4193 MATPEEAKLETFLHWLQPNGVELRGCKIKHCDSRKGFGIFSDKDVSDGILLAVPLDLAITPMRVLQDPLLGPACRSMFEEGHVDDRLLMMLLLTVERLRENSLWKPYLDMLPTTFHNPLWFSDDELQALRGTTLYRATELQKKSLISLYETKVKDLVKKLLTLDGASEIEVRYEDFLWANSVFWSRALNIPMPRSYVFPEMQEGEAQERDQVKQSENRTKEMMCTTTQGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGSTTGVPCCMYLQSAAPSPLQIDQEISISYGNKGNEELLYLYGFVIDDNTDDYLMVHYPAEALNTISFSESKSQLLEVQKAEMRCLLPKALLEQGFFPLGKQNKGESNNGKVDQVPNYSWSGQRKTPSYVNKLVFPEKFMTTLRTIAMQEDELYKVSSMLEELVGPEGGRELSDTDVQAAIWEVCGDSGAFEILVDLLRVKLMDLEEGSGTEESDLELLKKALIIDSHENNKHPRMENESEEHMAMSRNKWCSIVYRRGQKQLTRLFLKEAEHALHLSQNEQEFIVP 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90750g00008 546 Pfam SET domain 36 290 IPR001214 GO:0005515
Stsc90750g00008 546 CDD SET_LSMT 32 304 - -
Stsc90750g00008 546 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 495 - -
Stsc90750g00008 546 Gene3D set domain protein methyltransferase, domain 1 5 304 - -
Stsc90750g00008 546 SUPERFAMILY SET domain 8 308 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90750g00008 Stsc-Chr90750 55106 60612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90750g00008 1 190 NAC Transcription Factor Family AT3G56570 27.919 8.06e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc90750g00008 SET 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90750g00008 - - gmx:100777394 880.167